Related papers: Comment on " A simple model for DNA denaturation"
The interaction between polyelectrolyte and ionic surfactant is of great importance in different areas of chemistry and biology. In this paper we present a theory of polyelectrolyte ionic-surfactant solutions. The new theory successfully…
Deformation of single stranded DNA in translocation process before reaching the pore is investigated. By solving the Laplace equation in a suitable coordinate system and with appropriate boundary conditions, an approximate solution for the…
In this work we propose a combinatorial model that generalizes the standard definition of permutation. Our model generalizes the degenerate Eulerian polynomials and numbers of Carlitz from 1979 and provides missing combinatorial proofs for…
We have two aims. The main one is to expound the idea of renormalization in quantum field theory, with no technical prerequisites (Sections 2 and 3). Our motivation is that renormalization is undoubtedly one of the great ideas, and great…
I discuss the near-degeneracy between models of neutrino-nucleus interactions based on diverse assumptions, and analyze a specific example illustrating how the different reaction mechanisms taken into account, as well as the approximations…
Protection of the sensitive content is crucial for extensive information sharing. We present a technique of information concealing, based on introduction and maintenance of families of repeats. Repeats in DNA constitute a basic obstacle for…
We study the interplay between quantum geometry, interactions, and external fields in complex band systems. When Wannier obstructions preclude a description based solely on atomic-like orbitals, this complicates the prediction of…
At present, there have been suggested two types of physical mechanism that may facilitate preferential pairing between DNA molecules, with identical or similar base pair texts, without separation of base pairs. One solely relies on base…
We study the motion of long polymers (eg DNA) in a gel under the influence of an external force acting locally on small segments of the polymer. In particular, we examine the dependence of the drift velocity on the position where the force…
Recently, Babson and Steingrimsson have introduced generalised permutation patterns that allow the requirement that two adjacent letters in a pattern must be adjacent in the permutation. We consider pattern avoidance for such patterns, and…
The distance-resolved effective interaction between two star polymers in a good solvent is calculated by Molecular Dynamics computer simulations. The results are compared with a pair potential proposed recently by Likos et al. [Phys. Rev.…
The paper is withdrawn by the authors and replaced be an improved and extended version arxiv: 0812.2968
The cage model for polymer reptation, proposed by Evans and Edwards, and its recent extension to model DNA electrophoresis, are studied by numerically exact computation of the drift velocities for polymers with a length L of up to 15…
The simplified models of interaction of charged matter with resonance modes of radiation generalizing the well-known Jaynes-Cummings and Dicke models are considered. It is found that these new models are integrable for arbitrary numbers of…
We revisit the procedure of deformation of $C^*$-algebras via coactions of locally compact groups and extend the methods to cover deformations for maximal, reduced, and exotic coactions for a given group $G$ and circle-valued Borel…
An extension of the renormalization group method that includes the effect of retardation for the interactions of a fermion gas is used to re-examine the quantum and classical properties of Peierls- like states in one dimension. For models…
The aim of this paper is to introduce the degenerate generalized Laguerre polynomials as the degenerate version of the generalized Laguerre polynomials and to derive some properties related to those polynomials and Lah numbers, including an…
We consider several generalizations of the classical $\gamma$-positivity of Eulerian polynomials (and their derangement analogues) using generating functions and combinatorial theory of continued fractions. For the symmetric group, we prove…
Using small-angle neutron scattering and liquid integral equation theory, we relate the structure factor of flexible dendrimers of 4th generation to their average shape. The shape is measured as a radial density profile of monomers…
In [Kit1] Kitaev discussed simultaneous avoidance of two 3-patterns with no internal dashes, that is, where the patterns correspond to contiguous subwords in a permutation. In three essentially different cases, the numbers of such…