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A mesoscopic coarse-grain model for computationally-efficient simulations of biomembranes is presented. It combines molecular dynamics simulations for the lipids, modeled as elastic chains of beads, with multiparticle collision dynamics for…

Soft Condensed Matter · Physics 2015-06-04 Mu-Jie Huang , Raymond Kapral , Alexander S. Mikhailov , Hsuan-Yi Chen

Liquid droplets on fiber are often observed both in nature and in different engineering applications, like a fog harvesting mesh. Knowledge about drop-on-fiber morphology and its shedding under the influence of gravity can allow for the…

Soft Condensed Matter · Physics 2024-08-26 Arani Mukhopadhyay , Partha Sarathi Dutta , Amitava Datta , Ranjan Ganguly

We construct viscous fluid flow sourced by a force dipole embedded in a cylindrical fluid membrane, coupled to external embedding fluids. We find analytic expressions for the flow, in the limit of infinitely long and thin tubular membranes.…

Soft Condensed Matter · Physics 2025-06-23 Samyak Jain , Rickmoy Samanta

There is now growing evidence of the emergence and biological functionality of liquid crystal features, including nematic order and topological defects, in cellular tissues. However, how such features that intrinsically rely on particle…

Soft Condensed Matter · Physics 2019-02-06 Romain Mueller , Julia Yeomans , Amin Doostmohammadi

By means of sophisticated Monte Carlo methods, we investigate the conformational phase diagram of a simple model for flexible polymers with explicit thickness. The thickness constraint, which is introduced geometrically via the global…

Soft Condensed Matter · Physics 2009-02-06 Thomas Vogel , Thomas Neuhaus , Michael Bachmann , Wolfhard Janke

We theoretically investigate the relaxation dynamics of a nearly-flat binary lipid bilayer membrane by taking into account the membrane tension, hydrodynamics of the surrounding fluid, inter-monolayer friction and mutual diffusion in each…

Soft Condensed Matter · Physics 2016-05-05 Ryuichi Okamoto , Yuichi Kanemori , Shigeyuki Komura , Jean-Baptiste Fournier

Biomembranes and vesicles consisting of multiple phases can attain a multitude of shapes, undergoing complex shape transitions. We study a Cahn--Hilliard model on an evolving hypersurface coupled to Navier--Stokes equations on the surface…

Numerical Analysis · Mathematics 2019-11-01 John W. Barrett , Harald Garcke , Robert Nürnberg

We derive the expression of the stress tensor for one and two-component lipid membranes with density and composition inhomogeneities. We first express the membrane stress tensor as a function of the free-energy density by means of the…

Soft Condensed Matter · Physics 2015-03-17 Anne-Florence Bitbol , Luca Peliti , Jean-Baptiste Fournier

We use experiments to study the dynamics of the healing of a blister, a localized bump in a thin elastic layer that is adhered to a soft substrate everywhere except at the bump. We create a blister by gently placing a glass cover slip on a…

Soft Condensed Matter · Physics 2014-02-04 Jonathan E. Longley , L. Mahadevan , Manoj K. Chaudhury

We study a nonlinear, unsteady, moving boundary, fluid-structure (FSI) problem in which the structure is composed of two layers: a thin layer which is in contact with the fluid, and a thick layer which sits on top of the thin structural…

Analysis of PDEs · Mathematics 2013-05-24 Boris Muha , Suncica Canic

We carry out Monte Carlo simulations of a colloidal fluid membrane composed of chiral rod-like viruses. The membrane is modeled by a triangular mesh of beads connected by bonds in which the bonds and beads are free to move at each Monte…

Soft Condensed Matter · Physics 2020-09-23 Lijie Ding , Robert A. Pelcovits , Thomas R. Powers

Chemical reactions and biological processes are often governed by the structure and transport dynamics of the interface between two liquid phases. Despite their importance, our microscopic understanding of liquid-liquid interfaces has been…

Cellular membranes are a heterogeneous mix of lipids, proteins and small molecules. Special groupings of saturated lipids and cholesterol form a liquid-ordered phase, known as `lipid rafts,' serving as platforms for signaling, trafficking…

Quantitative Methods · Quantitative Biology 2015-05-13 Tristan S. Ursell , William S. Klug , Rob Phillips

We review recent molecular dynamics simulations of thermally activated undulations and defects in the lamellar $L_\alpha$ phase of a binary amphiphile-solvent mixture, using an idealized molecular coarse-grained model: Solvent particles are…

Soft Condensed Matter · Physics 2009-11-11 Claire Loison , Michel Mareschal , Friederike Schmid

Bilayer lipid membranes (BLMs) are an essential component of many biological systems, forming a functional barrier between the cell and the surrounding environment. When the membrane relaxes from a structural perturbation, the dynamics of…

Soft Condensed Matter · Physics 2015-07-27 R. J. Bingham , S. W. Smye , P. D. Olmsted

In this study, micro-droplets are placed on thin, glassy, free-standing films where the Laplace pressure of the droplet deforms the free-standing film, creating a bulge. The film's tension is modulated by changing temperature continuously…

Soft Condensed Matter · Physics 2017-06-26 Adam Fortais , Rafael D. Schulman , Kari Dalnoki-Veress

Thin viscous fluid threads falling onto a moving belt behave in a way reminiscent of a sewing machine, generating a rich variety of periodic stitch-like patterns including meanders, W-patterns, alternating loops, and translated coiling.…

Fluid Dynamics · Physics 2015-05-06 P. -T. Brun , Basile Audoly , Neil M. Ribe , Tom S. Eaves , John R. Lister

A phenomenological Landau elasticity for the shape, dilation, and lipid-tilt of bilayer membranes is developed. The shape mode couples with the sum of the monolayers' tilt, while the dilation mode couples with the difference of the…

Soft Condensed Matter · Physics 2009-10-31 J. -B. Fournier

This work is devoted to analyze the relation between the thermodynamic properties of a confined fluid and the shape of its confining vessel. Recently, new insights in this topic were found through the study of cluster integrals for…

Statistical Mechanics · Physics 2016-03-09 Ignacio Urrutia

Step-emulsification is a microfluidic technique for droplet generation which relies on the abrupt decrease of confinement of a liquid filament surrounded by a continuous phase. A striking feature of this geometry is the transition between…

Fluid Dynamics · Physics 2014-09-19 M. Hein , S. Afkhami , R. Seemann , L. Kondic
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