Related papers: Equilibrium shapes of flat knots
We present a methodology to simulate the mechanics of knots in elastic rods using geometrically nonlinear, full three-dimensional (3D) finite element analysis. We focus on the mechanical behavior of knots in tight configurations, for which…
Tests of the integrality properties of a scalar operator in topological strings on a resolved conifold background or orientifold of conifold backgrounds have been performed for arborescent knots and some non-arborescent knots. The recent…
The complex eikonal equation in $(3+1)$ dimensions is investigated. It is shown that this equation generates many multi soliton configurations with arbitrary value of the Hopf index. In general, these eikonal hopfions do not have the…
We describe four hyperbolic knot complements in $\mathbb{S}^3$, each of which covers a prism orbifold: the quotient of $\mathbb{H}^3$ by the action of a discrete group generated by reflections in the faces of a polyhedron that has the…
Optimal geometrical arrangements, such as the stacking of atoms, are of relevance in diverse disciplines. A classic problem is the determination of the optimal arrangement of spheres in three dimensions in order to achieve the highest…
We study the dynamics of knotted deformable closed chains sedimenting in a viscous fluid. We show experimentally that trefoil and other torus knots often attain a remarkably regular horizontal toroidal structure while sedimenting, with a…
We say that a knot $k_1$ in the $3$-sphere {\it $1$-dominates} another $k_2$ if there is a proper degree 1 map $E(k_1) \to E(k_2)$ between their exteriors, and write $k_1 \ge k_2$. When $k_1 \ge k_2$ but $k_1 \ne k_2$ we write $k_1 > k_2$.…
Relative self-linking and linking "numbers" for pairs of knots in oriented 3-manifolds are defined in terms of intersection invariants of immersed surfaces in 4-manifolds. The resulting concordance invariants generalize the usual…
The viscous flow of polymer chains in dense melts is dominated by topological constraints whenever the single chain contour length, N, becomes larger than the characteristic scale Ne, defining comprehensively the macroscopic rheological…
The relationships between braid ordering and the geometry of its closure is studied. We prove that if an essential closed surface $F$ in the complements of closed braid has relatively small genus with respect to the Dehornoy floor of the…
In this paper we present a detailed study of \emph{bonded knots} and their related structures, integrating recent developments into a single framework. Bonded knots are classical knots endowed with embedded bonding arcs modeling physical or…
Using methods of high performance computing, we have found indications that knotlike structures appear as stable finite energy solitons in a realistic 3+1 dimensional model. We have explicitly simulated the unknot and trefoil…
I define models of quantum loops and nets which have ground states with topological order. These make possible excited states comprised of deconfined anyons with non-abelian braiding. With the appropriate inner product, these quantum loop…
We study local conformational biases in the dynamics of {\alpha}-synuclein by using all-atom simulations with explicit and implicit solvents. The biases are related to the frequency of the specific contact formation. In both approaches, the…
We generalize the classical study of Alexander polynomials of smooth or PL locally-flat knots to PL knots that are not necessarily locally-flat. We introduce three families of generalized Alexander polynomials and study their properties.…
Prime power fold cyclic branched covers along smoothly slice knots all bound rational homology balls. This phenomenon, however, does not characterize slice knots. In this paper, we give a new construction of non-slice knots that have the…
This work concerns scalar field theories with topologically nontrivial vacuum manifold in rotationally symmetric backgrounds of arbitrary dimension. Lagrangians with canonical and generalized kinetic terms are considered, and a Bogomol'nyi…
We consider countable linear orders and study the quasi-order of convex embeddability and its induced equivalence relation. We obtain both combinatorial and descriptive set-theoretic results, and further extend our research to the case of…
In pattern-forming systems, localized patterns are states of intermediate complexity between fully extended ordered patterns and completely irregular patterns. They are formed by stationary fronts enclosing an ordered pattern inside an…
Knots are entangled structures that cannot be untangled without a cut. Topological stability of knots is one of the many examples of their important properties that can be used in information storage and transfer. Knot dynamics is important…