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We characterize the force state of shear-loaded granular matter by relating the macroscopic stress to statistical properties of the force network. The purely repulsive nature of the interaction between grains naturally provides an upper…

Disordered Systems and Neural Networks · Physics 2007-05-23 Wouter G. Ellenbroek , Jacco H. Snoeijer

This work targets the influence of disorder on the relaxed structure and macroscopic mechanical properties of elastic networks. We construct network classes of different types of disorder (length, topology and stiffness), which are…

Soft Condensed Matter · Physics 2025-08-29 Stefanie Heyden , Mohit Pundir , Eric R. Dufresne , David S. Kammer

We study the question of reconstructing a weighted, directed network up to isomorphism from its motifs. In order to tackle this question we first relax the usual (strong) notion of graph isomorphism to obtain a relaxation that we call weak…

Discrete Mathematics · Computer Science 2022-12-20 Samir Chowdhury , Facundo Mémoli

Biopolymer networks are common in biological systems from the cytoskeleton of individual cells to collagen in the extracellular matrix. The mechanics of these systems under applied strain can be explained in some cases by a phase transition…

Soft Condensed Matter · Physics 2022-12-21 Sadjad Arzash , Abhinav Sharma , Fred C. MacKintosh

We perform molecular dynamic (MD) simulations of frictional non-thermal particles driven by an externally applied shear stress. After the system jams following a transient flow, we probe its mechanical response in order to clarify whether…

Soft Condensed Matter · Physics 2012-02-09 Raffaele Pastore , Massimo Pica Ciamarra , Antonio Coniglio

Bone is a multiscale heterogeneous materiel of which principal function is to support the body structure and to resist mechanical loading and fractures. Bone strength does not depend only on the quantity and quality of bone which is…

Tissues and Organs · Quantitative Biology 2011-07-07 Abdelwahed Barkaoui , Awad Bettamer , Ridha Hambli

The robustness of dynamical properties of neuronal networks against structural damages is a central problem in computational and experimental neuroscience. Research has shown that the cortical network of a healthy brain works near a…

Neurons and Cognition · Quantitative Biology 2018-08-17 Abdorreza Goodarzinick , Mohammad D. Niry , Alireza Valizadeh , Matjaz Perc

The behavior of complex networks under failure or attack depends strongly on the specific scenario. Of special interest are scale-free networks, which are usually seen as robust under random failure but appear to be especially vulnerable to…

Physics and Society · Physics 2010-07-06 B. Berche , C. von Ferber , T. Holovatch , Yu. Holovatch

Reversible crosslinking is a design paradigm for polymeric materials, wherein they are microscopically reinforced with chemical species that form transient crosslinks between the polymer chains. Besides the potential for self-healing,…

Soft Condensed Matter · Physics 2019-04-29 Nicholas B. Tito , Costantino Creton , Cornelis Storm , Wouter G. Ellenbroek

Recently, adversarial deception becomes one of the most considerable threats to deep neural networks. However, compared to extensive research in new designs of various adversarial attacks and defenses, the neural networks' intrinsic…

Machine Learning · Computer Science 2019-05-13 Fuxun Yu , Zhuwei Qin , Chenchen Liu , Liang Zhao , Yanzhi Wang , Xiang Chen

Given a resistive electrical network, we would like to determine whether all the resistances (edges) in the network are working, and if not, identify which edge (or edges) are faulty. To make this determination, we are allowed to measure…

Optimization and Control · Mathematics 2026-02-17 Barbara Fiedorowicz , Amitabh Basu

Graph connectivity is a fundamental combinatorial optimization problem that arises in many practical applications, where usually a spanning subgraph of a network is used for its operation. However, in the real world, links may fail…

Data Structures and Algorithms · Computer Science 2022-09-13 Dimitris Fotakis , Evangelia Gergatsouli , Charilaos Pipis , Miltiadis Stouras , Christos Tzamos

Many real world models can be characterized as weak, meaning that there is significant uncertainty in both the data input and inferences. This lack of determinism makes it especially difficult for users of computer decision aids to…

Artificial Intelligence · Computer Science 2013-04-10 Holly B. Jimison

Complex networks are ubiquitous: a cell, the human brain, a group of people and the Internet are all examples of interconnected many-body systems characterized by macroscopic properties that cannot be trivially deduced from those of their…

We study the mean field approximation of a recent model of cascades on networks relevant to the investigation of systemic risk control in financial networks. In the model, the hypothesis of a trend reinforcement in the stochastic process…

Physics and Society · Physics 2007-11-13 Jan Lorenz , Stefano Battiston

In high-dimensional data settings, additional information on the features is often available. Examples of such external information in omics research are: (a) p-values from a previous study, (b) a summary of prior information, and (c) omics…

In interdependent networks, it is usually assumed, based on percolation theory, that nodes become nonfunctional if they lose connection to the network giant component. However, in reality, some nodes, equipped with alternative resources,…

Physics and Society · Physics 2017-07-05 Xin Yuan , Yanqing Hu , H. Eugene Stanley , Shlomo Havlin

The elastic network (EN) is a prime model that describes the long-time dynamics of biomolecules. However, the use of harmonic potentials renders this model insufficient for studying large conformational changes of proteins (e.g. stretching…

Biological Physics · Physics 2018-11-06 A. B. Poma , M. S. Li , P. E. Theodorakis

The Generalized Linear Model (GLM) for the Gamma distribution (glmGamma) is widely used in modeling continuous, non-negative and positive-skewed data, such as insurance claims and survival data. However, model selection for GLM depends on…

Methodology · Statistics 2018-04-24 Xin Chen , Aleksandr Y. Aravkin , R. Douglas Martin

Disordered athermal biopolymer materials, such as collagen networks that constitute a major component in extracellular matrices and various connective tissues, are initially soft and compliant but stiffen dramatically under strain. Such…

Soft Condensed Matter · Physics 2025-09-19 Zibin Zhang , Eran Bouchbinder , Edan Lerner
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