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We discuss a simple model of particles hopping in one dimension with attractive interactions. Taking a hydrodynamic limit in which the interaction strength increases with the system size, we observe the formation of multiple clusters of…

Statistical Mechanics · Physics 2017-05-05 Matthew Burman , Daniel Carpenter , Robert L. Jack

A recently introduced thermodynamic model of amphiphilic molecules in solution has yielded, under certain realistic conditions, a significant presence of metastable aggregates well below the critical micelle concentration -- a phenomenon…

Soft Condensed Matter · Physics 2009-04-12 Radina Hadgiivanova , Haim Diamant

The paper addresses aggregation issues for composite (modular) solutions. A systemic view point is suggested for various aggregation problems. Several solution structures are considered: sets, set morphologies, trees, etc. Mainly, the…

Software Engineering · Computer Science 2011-12-01 Mark Sh. Levin

Proteins can combine into functional elements in living cells or self-assemble into unwanted structures in a number of diseases. The resulting aggregates often display filamentous morphologies across a large range of protein shapes and…

Soft Condensed Matter · Physics 2026-05-18 Elena N. Govorun , Martin Lenz

We investigate the structure of a dilute mixture of amphiphilic dimers and spherical particles, a model relevant to the problem of encapsulating globular "guest" molecules in a dispersion. Dimers and spheres are taken to be hard particles,…

Soft Condensed Matter · Physics 2017-02-24 Santi Prestipino , Gianmarco Munaò , Dino Costa , Carlo Caccamo

We present a model of one-dimensional irreversible adsorption in which particles once adsorbed immediately shrink to a smaller size or expand to a larger size. Exact solutions for the fill factor and the particle number variance as a…

Disordered Systems and Neural Networks · Physics 2007-05-23 Arsen V. Subashiev , Serge Luryi

We show that we can construct a model in 3+1 dimensions where only composite scalars take place in physical processes as incoming and outgoing particles, whereas constituent spinors only act as intermediary particles. Hence while the…

High Energy Physics - Theory · Physics 2009-11-11 M. Hortacsu , B. C. Lutfuoglu

Aggregation of ice crystals is a key process governing precipitation. Individual ice crystals exhibit considerable diversity of shape, and a wide range of physical processes could influence their aggregation; despite this we show that a…

Atmospheric and Oceanic Physics · Physics 2015-06-26 C. D. Westbrook , R. C. Ball , P. R. Field , A. J. Heymsfield

A new model for a colloidal size-asymmetric binary mixture is proposed: The Square-Shoulder-Asakura-Oosawa. This belongs to the larger class of non-additive hard-spheres models and has the property that its effective pair formulation is…

Soft Condensed Matter · Physics 2016-11-30 Riccardo Fantoni

Hydrodynamic interactions between swimming or flying organisms can lead to complex flows on the scale of the group. These emergent fluid dynamics are often more complex than a linear superposition of individual organism flows, especially at…

Fluid Dynamics · Physics 2024-12-23 Nina Mohebbi , Joonha Hwang , Matthew K. Fu , John O. Dabiri

We study the self-assembly on a spherical surface of a model for a binary mixture of amphiphilic dimers in the presence of guest particles via Monte Carlo (MC) computer simulation. All particles have a hard core, but one monomer of the…

Soft Condensed Matter · Physics 2021-06-11 Nkosinathi Dlamini , Santi Prestipino , Giuseppe Pellicane

Inspired by a PDE-ODE system of aggregation developed in the biomathematical literature, an interacting particle system representing aggregation at the level of individuals is investigated. It is proved that the empirical density of the…

Probability · Mathematics 2019-07-22 Franco Flandoli , Marta Leocata

Protein aggregation in the form of amyloid fibrils has important biological and technological implications. Although the self-assembly process is highly efficient, aggregates not in the fibrillar form would also occur and it is important to…

Soft Condensed Matter · Physics 2010-01-20 Chiu Fan Lee

We use Monte Carlo simulation and the Reference Interaction Site Model (RISM) theory of molecular fluids to investigate a simple model of colloidal mixture consisting of dimers, made up of two tangent hard monomers of different size, and…

Soft Condensed Matter · Physics 2021-09-28 Gianmarco Munaò , Santi Prestipino , Dino Costa

Some nonequilibrium systems exhibit anomalous suppression of the large-scale density fluctuations, so-called hyperuniformity. Recently, hyperuniformity was found numerically in a simple model of chiral active fluids [Q.-L. Lei et al., Sci.…

Soft Condensed Matter · Physics 2023-11-13 Yuta Kuroda , Kunimasa Miyazaki

The fluid phase diagram of trimer particles composed of one central attractive bead and two repulsive beads was determined as a function of simple geometric parameters using flat-histogram Monte Carlo methods. A variety of self-assembled…

Soft Condensed Matter · Physics 2015-05-20 Harold W. Hatch , Jeetain Mittal , Vincent K. Shen

We investigate the collective dynamics of self-propelled droplets, confined in a one dimensional micro-fluidic channel. On one hand, neighboring droplets align and form large trains of droplets moving in the same direction. On the other…

Soft Condensed Matter · Physics 2020-05-14 Pierre Illien , Charlotte de Blois , Yang Liu , Marjolein N. van der Linden , Olivier Dauchot

Binary mixtures of amphiphiles in solution can self-assemble into a wide range of structures when the two species individually form aggregates of different curvatures. A specific example of this is seen in solutions of lipid mixtures where…

Soft Condensed Matter · Physics 2015-03-17 M. J. Greenall , G. Gompper

A simple three-dimensional model of a fluid whose constituent particles interact via a short range attractive and long range repulsive potential is used to model the aggregation into large spherical-like clusters made up of hundreds of…

Soft Condensed Matter · Physics 2025-02-11 Antonio Díaz-Pozuelo , Diego González-Salgado , Enrique Lomba

Recently first principles microscopic calculations, using the generalized gradient approximation, appeared for the solid mixed system $AgCl{_x}Br_{1-x}$ at various compositions. Here, we suggest a model that can estimate the compressibility…

Materials Science · Physics 2017-04-20 Efthimios S. Skordas