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We investigate Eigen's model for the evolution of the genetic code of microorganisms using a novel method based on population dynamics analysis. This model, for a given number of offspring, determines long-term survival as a function of the…

Populations and Evolution · Quantitative Biology 2024-06-21 Hermano Velten , Carlos Felipe Pinheiro , Alcides Castro e Silva

We introduce an interacting particle system which models the inherited sterility method. Individuals evolve on $\mathbb{Z}^d$ according to a contact process with parameter $\lambda>0$. With probability $p \in [0,1]$ an offspring is fertile…

Probability · Mathematics 2025-11-18 Sonia Velasco

The prevalence of sexual reproduction ("sex") in eukaryotes is an enigma of evolutionary biology. Sex increases genetic variation only tells its long-term superiority in essence. The accumulation of harmful mutations causes an immediate and…

Populations and Evolution · Quantitative Biology 2013-08-01 Xiang-Ping Jia , Hong Sun

This paper considers a nonlinear model for population dynamics with age structure. The fertility rate with respect to age is non constant and has the form proposed by [17]. Moreover, its multiplicative structure and the multiplicative…

General Mathematics · Mathematics 2023-12-06 Dragos-Patru Covei , Traian A. Pirvu , Catalin Sterbeti

Machines provide a longstanding model for how organisms accumulate damage, age, and die. However, the large-scale observation and analysis of complex machine populations under real-world conditions is routinely missing from this framework.…

Physics and Society · Physics 2025-05-20 Saul Justin Newman

In this paper we present a new modelling framework combining replicator dynamics (which is the standard model of frequency dependent selection) with the model of an age-structured population. The new framework allows for the modelling of…

Populations and Evolution · Quantitative Biology 2021-04-01 Krzysztof Argasinski , Mark Broom

In the renewal processes, if the waiting time probability density function is a tempered power-law distribution, then the process displays a transition dynamics; and the transition time depends on the parameter $\lambda$ of the exponential…

Statistics Theory · Mathematics 2016-06-21 Weihua Deng , Wanli Wang , Xinchun Tian , Yujiang Wu

The Wright-Fisher model is the most popular population model for describing the behaviour of evolutionary systems with a finite population size. Approximations to the model have commonly been used for the analysis of time-resolved genome…

Populations and Evolution · Quantitative Biology 2016-11-21 Nuno R. Nené , Ville Mustonen , Christopher J. R. Illingworth

We consider a system of nonlinear partial differential equations that describes an age-structured population inhabiting several temporally varying patches. We prove existence and uniqueness of solution and analyze its large-time behavior in…

Dynamical Systems · Mathematics 2017-02-21 Vladimir Kozlov , Sonja Radosavljevic , Vladimir G. Tkachev , Uno Wennergren

Background: Hybridogenesis is a very interesting example of reproduction which seems to integrate the sexual and clonal processes in one system. In a case of frogs, described in the paper, two parental species - Rana lessonae and Rana…

Genomics · Quantitative Biology 2009-03-18 Mateusz Kula , Katarzyna Bonkowska , Maria Ogielska , Piotr Kierzkowski , Anna Zalesna , Stanislaw Cebrat

The chronological age used in demography describes the linear evolution of the life of a living being. The chronological age cannot give precise information about the exact developmental stage or aging processes an organism has reached. On…

Analysis of PDEs · Mathematics 2023-10-02 Jacques Demongeot , Pierre Magal

The idea of this review is to connect the different models of evolution to those of biological ageing through Darwin's theory. We start with the Eigen model of quasispecies for microevolution, then introduce the Bak-Sneppen model for…

Statistical Mechanics · Physics 2007-05-23 S. Moss de Oliveira , Domingos Alves , J. S. Sa Martins

We have analyzed the relations between the mutational pressure, recombination and selection pressure in the bit-string model with sexual reproduction. For specific sets of these parameters we have found three phase transitions with one…

Populations and Evolution · Quantitative Biology 2007-05-23 D. Stauffer , S. Cebrat

The study of immune system aging, i.e. immunosenescence, is a relatively new research topic. It deals with understanding the processes of immunodegradation that indicate signs of functionality loss possibly leading to death. Even though it…

Artificial Intelligence · Computer Science 2010-07-05 Grazziela P. Figueredo , Uwe Aickelin , Amanda Whitbrook

We study a parabolic Lotka-Volterra type equation that describes the evolution of a population structured by a phenotypic trait, under the effects of mutations and competition for resources modelled by a nonlocal feedback. The limit of…

Analysis of PDEs · Mathematics 2020-03-13 Manon Costa , Christèle Etchegaray , Sepideh Mirrahimi

This paper is concerned with the evolution of haploid organisms that reproduce asexually. In a seminal piece of work, Eigen and coauthors proposed the quasispecies model in an attempt to understand such an evolutionary process. Their work…

Populations and Evolution · Quantitative Biology 2012-03-07 Narendra M. Dixit , Piyush Srivastava , Nisheeth K. Vishnoi

We introduce an individual-based model of a complex ecological community with random interactions. The model contains a large number of species, each with a finite population of individuals, subject to discrete reproduction and death…

Populations and Evolution · Quantitative Biology 2023-07-19 Ferran Larroya , Tobias Galla

We propose a stochastic model for evolution through mutation and natural selection of a population that evolves on a $\bbT_d^+$ tree. We think of this model as a way of describing the evolution fitness landscape of a population. We obtain…

Probability · Mathematics 2021-04-13 Carolina Grejo , Fabio Lopes , Fábio Machado , Alejandro Roldán-Correa

According to the "hard-steps" model, the origin of humanity required "successful passage through a number of intermediate steps" (so-called "hard" or "critical" steps) that were intrinsically improbable with respect to the total time…

Populations and Evolution · Quantitative Biology 2025-02-18 Daniel B. Mills , Jennifer L. Macalady , Adam Frank , Jason T. Wright

Death has long been overlooked in evolutionary algorithms. Recent research has shown that death (when applied properly) can benefit the overall fitness of a population and can outperform sub-sections of a population that are "immortal" when…

Neural and Evolutionary Computing · Computer Science 2021-09-29 Micah Burkhardt , Roman V. Yampolskiy
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