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We have used the Monte Carlo based computer models to show that selection pressure could affect the distribution of recombination hotspots along the chromosome. Close to critical crossover rate, where genomes may switch between the…

Genomics · Quantitative Biology 2015-05-13 Jakub Kowalski , Wojciech Waga , Marta Zawierta , Stanislaw Cebrat

Alternative splicing allows an organism to make different proteins in different cells at different times, all from the same gene. In a cell that uses alternative splicing, the total length of all the exons is much shorter than in a cell…

Genomics · Quantitative Biology 2009-11-10 Kevin Cahill

A novel mechanism for sympatric speciation that takes into account complex bio-processes within each individual organism is proposed. According to dynamical systems theory, organisms with identical genotypes can possess differentiated…

Condensed Matter · Physics 2007-05-23 Kunihiko Kaneko , Tetsuya Yomo

The probability of the survival of the population of individuals of both sexes of given mature age, procreation rate and structure stability has been searched in the numerical experiment. The populations with long period of reproduction and…

Condensed Matter · Physics 2007-05-23 Kazimierz Pater

We analyze a stylized model of co-evolution between any two purely competing species (e.g., host and parasite), both sexually reproducing. Similarly to a recent model of Livnat \etal~\cite{evolfocs14} the fitness of an individual depends on…

Computer Science and Game Theory · Computer Science 2017-11-21 Georgios Piliouras , Leonard J. Schulman

Population expansions trigger many biomedical and ecological transitions, from tumor growth to invasions of non-native species. Although population spreading often selects for more invasive phenotypes, we show that this outcome is far from…

Populations and Evolution · Quantitative Biology 2015-12-14 Kirill S. Korolev

We built a two-state model of an asexually reproducing organism in a periodic environment endowed with the capability to anticipate an upcoming environmental change and undergo pre-emptive switching. By virtue of these anticipatory…

Populations and Evolution · Quantitative Biology 2018-11-26 D. V. Arjun , Pallab Basu , Sayak Mukherjee

Polyploidization is an evolutionary process by which a species acquires multiple copies of its complete set of chromosomes. The reticulate nature of the signal left behind by it means that phylogenetic networks offer themselves as a…

Populations and Evolution · Quantitative Biology 2023-02-21 Katharina T. Huber , Liam J. Maher

Many human males produce dysfunctional sperm. Various plants frequently abort pollen. Hybrid matings often produce sterile males. Widespread male sterility is puzzling. Natural selection prunes reproductive failure. Puzzling failure implies…

Populations and Evolution · Quantitative Biology 2016-09-13 Steven A. Frank

We investigate the distribution of flavonoids, a major category of plant secondary metabolites, across species. Flavonoids are known to show high species specificity, and were once considered as chemical markers for understanding adaptive…

Molecular Networks · Quantitative Biology 2009-04-23 Kazuhiro Takemoto , Masanori Arita

The origin of altruistic behavior, i.e. the behavior that is useful for a population or a species but goes at the expense of an altruistic individual, has long been a challenge for students of evolutionary biology. The populations with…

Populations and Evolution · Quantitative Biology 2010-02-24 T. Kulich , J. Flegr

The two classic theories for the existence of sexual replication are that sex purges deleterious mutations from a population, and that sex allows a population to adapt more rapidly to changing environments. These two theories have often…

Populations and Evolution · Quantitative Biology 2008-09-02 Pavel Gorodetsky , Emmanuel Tannenbaum

We consider a system of two competing populations in two-dimensional heterogeneous environments. The populations are assumed to move horizontally and vertically with different probabilities, but are otherwise identical. We regard these…

Analysis of PDEs · Mathematics 2020-02-26 Emeric Bouin , Guillaume Legendre , Yuan Lou , Nichole Slover

The self-protection of alliances against external invaders is a key concept behind the maintenance of biodiversity in the face of natural selection. But since these alliances, which can be formed by different numbers of competitors, can…

Populations and Evolution · Quantitative Biology 2022-12-07 Attila Szolnoki , Matjaz Perc

We consider an evolution algebra which corresponds to a bisexual population with a set of females partitioned into finitely many different types and the males having only one type. We study basic properties of the algebra. This algebra is…

Commutative Algebra · Mathematics 2013-07-19 M. Ladra , U. A. Rozikov

Evolution and learning are two of the fundamental mechanisms by which life adapts in order to survive and to transcend limitations. These biological phenomena inspired successful computational methods such as evolutionary algorithms and…

Neural and Evolutionary Computing · Computer Science 2019-05-10 Jan Schuchardt , Vladimir Golkov , Daniel Cremers

Using game theory we provide mathematical proof that if a species of asexually reproducing microbes does not possess maximum variability in competitive abilities amongst its individual organisms, then that species is vulnerable to…

Populations and Evolution · Quantitative Biology 2020-12-15 Susanne Menden-Deuer , Julie Rowlett

We consider braids with repeating patterns inside arbitrary knots which provides a multi-parametric family of knots, depending on the "evolution" parameter, which controls the number of repetitions. The dependence of knot (super)polynomials…

High Energy Physics - Theory · Physics 2014-01-30 A. Mironov , A. Morozov , An. Morozov

No abstract given. Confirms earlier simulatiobns of the self-organization of dominance in the sexual Penna model, and the advantage of hermaphroditic over sexual reproduction.

Populations and Evolution · Quantitative Biology 2007-05-23 Klaus Blindert

Intragenomic recombination (crossover) is a very important evolutionary mechanism. The crossover events are not evenly distributed along the natural chromosomes. Monte Carlo simulations revealed that frequency of recombinations decides…

Genomics · Quantitative Biology 2009-01-13 Wojciech Waga , Marta Zawierta , Jakub Kowalski , Stanislaw Cebrat