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We investigate the effect of noise on Random Boolean Networks. Noise is implemented as a probability $p$ that a node does not obey its deterministic update rule. We define two order parameters, the long-time average of the Hamming distance…

Biological Physics · Physics 2009-11-13 Tiago P. Peixoto , Barbara Drossel

The goal of this tutorial is to promote interest in the study of random Boolean networks (RBNs). These can be very interesting models, since one does not have to assume any functionality or particular connectivity of the networks to study…

Adaptation and Self-Organizing Systems · Physics 2009-09-29 Carlos Gershenson

The behavior of homogeneous and disordered systems with a free boundary is described on the basis of group theory in the two-loop approximation directly in three-dimensional space. The effect of the free boundary on the regime of the bulk…

Statistical Mechanics · Physics 2009-11-13 S. V. Belim

A Boolean control network (BCN) is a discrete-time dynamical system whose variables take values from a binary set $\{0,1\}$. At each time step, each variable of the BCN updates its value simultaneously according to a Boolean function which…

Systems and Control · Computer Science 2019-07-23 Qunxi Zhu , Zuguang Gao , Yang Liu , Weihua Gui

In a balancing network each processor has an initial collection of unit-size jobs (tokens) and in each round, pairs of processors connected by balancers split their load as evenly as possible. An excess token (if any) is placed according to…

Data Structures and Algorithms · Computer Science 2010-06-09 Tobias Friedrich , Thomas Sauerwald , Dan Vilenchik

Using the Bak-Sneppen model of biological evolution as our paradigm, we investigate in which cases noise can be substituted with a deterministic signal without destroying Self-Organized Criticality (SOC). If the deterministic signal is…

Condensed Matter · Physics 2009-10-30 Paolo De Los Rios , Angelo Valleriani , Jose Luis Vega

Here we provide a detailed analysis, along with some extensions and additonal investigations, of a recently proposed self-organised model for the evolution of complex networks. Vertices of the network are characterised by a fitness variable…

Physics and Society · Physics 2008-08-29 Guido Caldarelli , Andrea Capocci , Diego Garlaschelli

It has been shown that uniform as well as non-uniform cellular automata (CA) can be evolved to perform certain computational tasks. Random Boolean networks are a generalization of two-state cellular automata, where the interconnection…

Disordered Systems and Neural Networks · Physics 2007-05-23 Bertrand Mesot , Christof Teuscher

In this work we consider random Boolean networks that provide a general model for genetic regulatory networks. We extend the analysis of James Lynch who was able to proof Kauffman's conjecture that in the ordered phase of random networks,…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Steffen Schober , Martin Bossert

Boolean networks have been widely used in many areas of science and engineering to represent various dynamical behaviour. In systems biology, they became useful tools to study the dynamical characteristics of large-scale biomolecular…

Dynamical Systems · Mathematics 2024-01-01 Jongrae Kim , Woojeong Lee , Kwang-Hyun Cho

Previous work showed that the collective activity of large neuronal networks can be tamed to remain near its critical point by a feedback control that maximizes the temporal correlations of the mean-field fluctuations. Since such…

Neurons and Cognition · Quantitative Biology 2023-03-29 Juliane T. Moraes , Eyisto J. Aguilar Trejo , Sabrina Camargo , Silvio C. Ferreira , Dante R. Chialvo

The notion of (auto) catalytic networks has become a cornerstone in understanding the possibility of a sudden dramatic increase of diversity in biological evolution as well as in the evolution of social and economical systems. Here we study…

Other Condensed Matter · Physics 2016-10-05 Rudolf Hanel , Stuart A. Kauffman , Stefan Thurner

Early-warning signals of delicate design are always used to predict critical transitions in complex systems, which makes it possible to render the systems far away from the catastrophic state by introducing timely interventions. Traditional…

Machine Learning · Computer Science 2024-12-25 Shirui Bian , Zezhou Wang , Siyang Leng , Wei Lin , Jifan Shi

We uncover a dynamical entanglement transition in a monitored quantum system that is heralded by a local order parameter. Classically, chaotic systems can be stochastically controlled onto unstable periodic orbits and exhibit controlled and…

Disordered Systems and Neural Networks · Physics 2022-08-10 Thomas Iadecola , Sriram Ganeshan , J. H. Pixley , Justin H. Wilson

Order can spontaneously emerge from seemingly noisy interactions between biological agents, like a flock of birds changing their direction of flight in unison, without a leader or an external cue. We are interested in the generic conditions…

Biological Physics · Physics 2021-03-09 Carsten T. van de Kamp , George Dadunashvili , Johan L. A. Dubbeldam , Timon Idema

Experiments in various neural systems found avalanches: bursts of activity with characteristics typical for critical dynamics. A possible explanation for their occurrence is an underlying network that self-organizes into a critical state.…

Neurons and Cognition · Quantitative Biology 2018-11-08 Felipe Yaroslav Kalle Kossio , Sven Goedeke , Benjamin van den Akker , Borja Ibarz , Raoul-Martin Memmesheimer

We explore quantum phase transitions using two probes of quantum chaos: out-of-time-order correlators (OTOCs) and the $r$-parameter obtained from the level spacing statistics. In particular, we address $p$-spin models associated with…

High Energy Physics - Theory · Physics 2021-09-01 Kyoung-Bum Huh , Kazuki Ikeda , Viktor Jahnke , Keun-Young Kim

We systematically study and compare damage spreading for random Boolean and threshold networks under small external perturbations (damage), a problem which is relevant to many biological networks. We identify a new characteristic…

Disordered Systems and Neural Networks · Physics 2008-04-30 Thimo Rohlf , Natali Gulbahce , Christof Teuscher

We consider the behaviour of open quantum systems in dependence on the coupling to one decay channel by introducing the coupling parameter $\alpha$ being proportional to the average degree of overlapping. Under critical conditions, a…

Quantum Physics · Physics 2009-10-31 C. Jung , M. Mueller , I. Rotter

Percolation establishes the connectivity of complex networks and is one of the most fundamental critical phenomena for the study of complex systems. On simple networks, percolation displays a second-order phase transition; on multiplex…

Adaptation and Self-Organizing Systems · Physics 2023-03-14 Hanlin Sun , Filippo Radicchi , Jürgen Kurths , Ginestra Bianconi