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We study the properties of the distance between attractors in Random Boolean Networks, a prominent model of genetic regulatory networks. We define three distance measures, upon which attractor distance matrices are constructed and their…

Neural and Evolutionary Computing · Computer Science 2010-11-23 Andrea Roli , Stefano Benedettini , Roberto Serra , Marco Villani

In neural circuits, statistical connectivity rules strongly depend on neuronal type. Here we study dynamics of neural networks with cell-type specific connectivity by extending the dynamic mean field method, and find that these networks…

Neurons and Cognition · Quantitative Biology 2015-02-24 Johnatan Aljadeff , Merav Stern , Tatyana O. Sharpee

We show that to correctly describe the position of the critical line in the Kauffman random boolean networks one must take into account percolation phenomena underlying the process of damage spreading. For this reason, since the issue of…

Disordered Systems and Neural Networks · Physics 2015-05-13 Piotr Fronczak , Agata Fronczak

The "edge of chaos" phase transition in artificial neural networks is of renewed interest in light of recent evidence for criticality in brain dynamics. Statistical mechanics traditionally studied this transition with connectivity $k$ as…

Disordered Systems and Neural Networks · Physics 2019-07-17 Lorenz Baumgarten , Stefan Bornholdt

Most models of complex systems have been homogeneous, i.e., all elements have the same properties (spatial, temporal, structural, functional). However, most natural systems are heterogeneous: few elements are more relevant, larger,…

Adaptation and Self-Organizing Systems · Physics 2025-12-22 Amahury Jafet López-Díaz , Fernanda Sánchez-Puig , Carlos Gershenson

The relationship between the properties of a dynamical system and the structure of its defining equations has long been studied in many contexts. Here we study this problem for the class of conjunctive (resp. disjunctive) Boolean networks,…

Combinatorics · Mathematics 2008-05-13 Abdul Salam Jarrah , Reinhard Laubenbacher , Alan Veliz-Cuba

We calculate analytically the critical connectivity $K_c$ of Random Threshold Networks (RTN) for homogeneous and inhomogeneous thresholds, and confirm the results by numerical simulations. We find a super-linear increase of $K_c$ with the…

Disordered Systems and Neural Networks · Physics 2009-11-13 Thimo Rohlf

We demonstrate, both analytically and numerically, that learning dynamics of neural networks is generically attracted towards a self-organized critical state. The effect can be modeled with quartic interactions between non-trainable…

Statistical Mechanics · Physics 2021-07-09 Mikhail I. Katsnelson , Vitaly Vanchurin , Tom Westerhout

We investigate dynamical properties of a quantum generalization of classical reversible Boolean networks. The state of each node is encoded as a single qubit, and classical Boolean logic operations are supplemented by controlled bit-flip…

Quantum Physics · Physics 2022-01-05 Lucas Kluge , Joshua E. S. Socolar , Eckehard Schöll

Self-organized criticality is characterized by power law correlations in the non-equilibrium steady state of externally driven systems. A dynamical system proposed here self-organizes itself to a critical state with no characteristic size…

Soft Condensed Matter · Physics 2009-11-11 Santanu Sinha , Vimal Kishore , S. B. Santra

We study the effects of noise on the dynamics of a system of coupled self-propelling particles in the case where the coupling is time-delayed, and the delays are discrete and randomly generated. Previous work has demonstrated that the…

Pattern Formation and Solitons · Physics 2012-10-08 Brandon Lindley , Luis Mier-y-Teran-Romero , Ira B. Schwartz

It has been shown that self-triggered control has the ability to reduce computational loads and deal with the cases with constrained resources by properly setting up the rules for updating the system control when necessary. In this paper,…

Systems and Control · Electrical Eng. & Systems 2020-07-07 Min Meng , Gaoxi Xiao , Daizhan Cheng

In a Nature article, Scheffer et al. presented a novel data-driven framework to predict critical transitions in complex systems. These transitions, which may stem from failures, degradation, or adversarial actions, have been attributed to…

Optimization and Control · Mathematics 2022-08-09 Mohammad Pirani , Saber Jafarpour

The observation of apparent power-laws in neuronal systems has led to the suggestion that the brain is at, or close to, a critical state and may be a self-organised critical system. Within the framework of self-organised criticality a…

Neurons and Cognition · Quantitative Biology 2014-10-22 Caroline Hartley , Timothy J Taylor , Istvan Z Kiss , Simon F Farmer , Luc Berthouze

The recently measured yeast transcriptional network is analyzed in terms of simplified Boolean network models, with the aim of determining feasible rule structures, given the requirement of stable solutions of the generated Boolean…

Molecular Networks · Quantitative Biology 2009-11-10 Stuart Kauffman , Carsten Peterson , Björn Samuelsson , Carl Troein

We present a renormalization-grouplike method performed in the state space for detecting the dynamical behaviors of large scale-free Boolean networks, especially for the chaotic regime as well as the edge of chaos. Numerical simulations…

Disordered Systems and Neural Networks · Physics 2007-05-23 Wen-Xu Wang , Gang Yan , Jie Ren , Bing-Hong Wang

One way to model telecommunication networks are static Boolean models. However, dynamics such as node mobility have a significant impact on the performance evaluation of such networks. Consider a Boolean model in $\mathbb{R}^d$ and a random…

Probability · Mathematics 2021-12-24 Nils Aschenbruck , Stephan Bussmann , Hanna Döring

In this paper we try to end the debate concerning the suitability of different updating schemes in random Boolean networks (RBNs). We quantify for the first time loose attractors in asyncrhonous RBNs, which allows us to analyze the…

Adaptation and Self-Organizing Systems · Physics 2011-11-10 Carlos Gershenson

We study two measures of the complexity of heterogeneous extended systems, taking random Boolean networks as prototypical cases. A measure defined by Shalizi et al. for cellular automata, based on a criterion for optimal statistical…

Cellular Automata and Lattice Gases · Physics 2012-06-12 Xinwei Gong , Joshua E. S. Socolar

We study the problem of computing a minimal subset of nodes of a given asynchronous Boolean network that need to be controlled to drive its dynamics from an initial steady state (or attractor) to a target steady state. Due to the phenomenon…

Systems and Control · Computer Science 2018-05-18 Soumya Paul , Cui Su , Jun Pang , Andrzej Mizera
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