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Knots on ring polymers tend to be tight. For knots on charged polymers (polyelectrolytes), electrostatic repulsion among the monomers is considered to enhance the persistence length and further localize the knots. However, the effects of…

Soft Condensed Matter · Physics 2023-02-03 Shensheng Chen , Tingtao Zhou

The rheology of F-actin networks has attracted a great attention during the last years. In order to gain a complete understanding of the rheological properties of these novel materials, it is necessary the study in a large deformations…

Soft Condensed Matter · Physics 2017-02-07 Horacio López-Menéndez , José Félix Rodríguez

We have studied the elastic response of actin networks with both compliant and rigid crosslinks by modeling molecular motors as force dipoles. Our finite element simulations show that for compliant crosslinkers such as filamin A, the…

Soft Condensed Matter · Physics 2010-09-06 Peng Chen , Vivek B. Shenoy

We study the interaction potential between two polyions inside a colloidal suspension. It is shown that at large separation the interaction potential is purely repulsive, with the induced attractive interactions being doubly screened. For…

Soft Condensed Matter · Physics 2015-06-25 Yan Levin

Conditions at which a quasi-one-dimensional (1D) electron system can be considered as a quantum liquid of impenetrable charged particles are theoretically analyzed. In the presence of an inert, neutralizing background, a motion of…

Superconductivity · Physics 2024-06-21 Yu. P. Monarkha

The mechanism of multivalent counterion-induced bundle formation by filamentous actin (F-actin) is studied using a coarse-grained model and molecular dynamics simulation. Real diameter size, helically ordered charge distribution and twist…

Soft Condensed Matter · Physics 2012-03-01 Sarah Mohammadinejad , Ramin Golestanian , Hossein Fazli

Forced desorption of a semiflexible polymer chain on a solid substrate is theoretically investigated. The pulling force versus displacement is studied for different adsorption energy and persistence length P. It is found that the…

Statistical Mechanics · Physics 2015-06-19 Pui-Man Lam , Yi Zhen

At the heart of the structured architecture and complex dynamics of biological systems are specific and timely interactions operated by biomolecules. In many instances, biomolecular agents are spatially confined to flexible lipid membranes…

Soft Condensed Matter · Physics 2020-01-08 Bortolo Mognetti , Pietro Cicuta , Lorenzo Di Michele

Conjugated polymers are observed to aggregate in solution. To account for this observation we propose a inter-chain binding mechanism based on the intermolecular tunneling of the delocalized $\pi$-electrons occurring at points where the…

Soft Condensed Matter · Physics 2013-05-29 Jeremy D. Schmit , Alex J. Levine

A repulsive interaction model of superconductivity (SC) is studied for tight-binding models with three-fold degenerate molecular orbitals. Taking a weak-coupling approach, we derive dimensionless coupling constants for various symmetries of…

Strongly Correlated Electrons · Physics 2015-06-12 Satoshi Yamazaki , Yoshio Kuramoto

The effective elasticity of highly charged stiff polyelectrolytes is studied in the presence of counterions, with and without added salt. The rigid polymer conformations may become unstable due to an effective attraction induced by…

Soft Condensed Matter · Physics 2009-10-31 Ramin Golestanian , Mehran Kardar , Tanniemola B. Liverpool

Nonequilibrium electronic transport through a polymer chain is investigated by the scattering state operator method. The polymer chain is described by an electron-lattice coupling model and its two ends are connected with metal electrodes…

Mesoscale and Nanoscale Physics · Physics 2012-06-15 Jia Wang , Yue Yang , Yao Yao , Chang-Qin Wu

Blends of polymers of different topologies, such as ring and supercoiled, naturally occur in biology and often exhibit emergent viscoelastic properties coveted in industry. However, due to their complexity, along with the difficulty of…

The semiflexible F-actin network of the cytoskeleton is cross-linked by a variety of proteins including filamin, which contain Ig-domains that unfold under applied tension. We examine a simple semiflexible network model cross-linked by such…

Soft Condensed Matter · Physics 2009-11-11 B. A. DiDonna , Alex J. Levine

DNA bending on length scales shorter than a persistence length plays an integral role in the translation of genetic information from DNA to cellular function. Quantitative experimental studies of these biological systems have led to a…

Soft Condensed Matter · Physics 2009-11-11 Paul A. Wiggins , Philip C. Nelson

Developing construction methods of materials tailored for given applications with absolute control over building block placement poses an immense challenge. DNA-coated colloids offer the possibility of realising programmable self-assembly,…

Soft Condensed Matter · Physics 2020-05-22 Xiuyang Xia , Hao Hu , Massimo Pica Ciamarra , Ran Ni

The problem of charged polymer chains (polyelectrolytes) as they adsorb on a planar surface is addressed theoretically. We review the basic mechanisms and theory underlying polyelectrolyte adsorption on a single surface in two situations:…

Soft Condensed Matter · Physics 2012-01-31 David Andelman , Jean-Francois Joanny

Charge transport in polymers, such as polyacrylonitrile (PAN), is crucial for electronics and energy storage. For instance, PAN can transport cations e.g., Li+, by facilitating dynamic cation-nitrile coordination in batteries. However,…

Polymer translocation has long been a topic of interest in the field of biological physics given its relevance in both biological (protein and DNA/RNA translocation through nuclear and cell membranes) and technological processes (nanopore…

Soft Condensed Matter · Physics 2023-09-11 Alejandro Sainz-Agost , Fernando Falo , Alessandro Fiasconaro

Motivated by the organization of crosslinked cytoskeletal biopolymers, we present a semimicroscopic replica field theory for the formation of anisotropic random networks of semiflexible polymers. The networks are formed by introducing…

Soft Condensed Matter · Physics 2007-11-10 Panayotis Benetatos , Annette Zippelius
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