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Numerous practical medical problems often involve data that possess a combination of both sparse and non-sparse structures. Traditional penalized regularizations techniques, primarily designed for promoting sparsity, are inadequate to…

Methodology · Statistics 2023-11-10 Shun Yu , Yuehan Yang

Targeting simulations on parallel hardware architectures, this paper presents computational kernels for efficient computations in mortar finite element methods. Mortar methods enable a variationally consistent imposition of coupling…

Numerical Analysis · Mathematics 2023-08-25 Matthias Mayr , Alexander Popp

Deep neural networks have achieved remarkable breakthroughs by leveraging multiple layers of data processing to extract hidden representations, albeit at the cost of large electronic computing power. To enhance energy efficiency and speed,…

Sparse matrix multiplication is traditionally performed in memory and scales to large matrices using the distributed memory of multiple nodes. In contrast, we scale sparse matrix multiplication beyond memory capacity by implementing sparse…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-15 Da Zheng , Disa Mhembere , Vince Lyzinski , Joshua Vogelstein , Carey E. Priebe , Randal Burns

Several methods for density matrix propagation in distributed computing environments, such as clusters and graphics processing units, are proposed and evaluated. It is demonstrated that the large communication overhead associated with each…

Chemical Physics · Physics 2014-07-16 Luke J. Edwards , Ilya Kuprov

Although reliable long precision floating-point arithmetic libraries such as QD and MPFR/GMP are necessary to solve ill-conditioned problems in numerical simulation, long precision BLAS-level computation such as matrix multiplication has…

Mathematical Software · Computer Science 2017-10-06 Tomonori Kouya

Scientific workloads have traditionally exploited high levels of sparsity to accelerate computation and reduce memory requirements. While deep neural networks can be made sparse, achieving practical speedups on GPUs is difficult because…

Machine Learning · Computer Science 2020-09-02 Trevor Gale , Matei Zaharia , Cliff Young , Erich Elsen

Sparse matrix-matrix multiplication (SpGEMM) is a widely used kernel in various graph, scientific computing and machine learning algorithms. In this paper, we consider SpGEMMs performed on hundreds of thousands of processors generating…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-19 Md Taufique Hussain , Oguz Selvitopi , Aydin Buluç , Ariful Azad

In this work, we develop a new fast algorithm, spaQR -- sparsified QR, for solving large, sparse linear systems. The key to our approach is using low-rank approximations to sparsify the separators in a Nested Dissection based Householder QR…

Numerical Analysis · Mathematics 2020-10-15 Abeynaya Gnanasekaran , Eric Darve

Linear algebraic expressions are the essence of many computationally intensive problems, including scientific simulations and machine learning applications. However, translating high-level formulations of these expressions to efficient…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-22 Dániel Berényi , András Leitereg , Gábor Lehel

A parallel algorithm has perfect strong scaling if its running time on P processors is linear in 1/P, including all communication costs. Distributed-memory parallel algorithms for matrix multiplication with perfect strong scaling have only…

Data Structures and Algorithms · Computer Science 2012-02-16 Grey Ballard , James Demmel , Olga Holtz , Benjamin Lipshitz , Oded Schwartz

In split machine learning (ML), different partitions of a neural network (NN) are executed by different computing nodes, requiring a large amount of communication cost. To ease communication burden, over-the-air computation (OAC) can…

Machine Learning · Computer Science 2022-12-13 Yuzhi Yang , Zhaoyang Zhang , Yuqing Tian , Zhaohui Yang , Chongwen Huang , Caijun Zhong , Kai-Kit Wong

The matrices used in many computational settings are naturally sparse, holding a small percentage of nonzero elements. Storing such matrices in specialized sparse formats enables algorithms that avoid wasting computation on zeros,…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-13 Pratyush Das , Amirhossein Basareh , Adhitha Dias , Artem Pelenitsyn , Kirshanthan Sundararajah , Milind Kulkarni , Ben Delaware

As multicore systems continue to gain ground in the High Performance Computing world, linear algebra algorithms have to be reformulated or new algorithms have to be developed in order to take advantage of the architectural features on these…

Mathematical Software · Computer Science 2008-06-12 Alfredo Buttari , Julien Langou , Jakub Kurzak , Jack Dongarra

Structured sparsity is an efficient way to prune the complexity of modern Machine Learning (ML) applications and to simplify the handling of sparse data in hardware. In such cases, the acceleration of structured-sparse ML models is handled…

Hardware Architecture · Computer Science 2024-02-19 Christodoulos Peltekis , Dionysios Filippas , Giorgos Dimitrakopoulos

Neural network (NN) accelerators with multi-chip-module (MCM) architectures enable integration of massive computation capability; however, they face challenges of computing resource underutilization and off-chip communication overheads.…

Hardware Architecture · Computer Science 2026-02-17 Zongle Huang , Hongyang Jia , Kaiwei Zou , Yongpan Liu

Hardware double precision is often insufficient to solve large scientific problems accurately. Computing in higher precision defined by software causes significant computational overhead. The application of parallel algorithms compensates…

Mathematical Software · Computer Science 2020-12-15 Jan Verschelde

In a previous paper it was shown that a machine learning regression problem can be solved within the framework of random function theory, with the optimal kernel analytically derived from symmetry and indifference principles and coinciding…

Machine Learning · Computer Science 2025-12-19 Yuriy N. Bakhvalov

Many forms of programmable matter have been proposed for various tasks. We use an abstract model of self-organizing particle systems for programmable matter which could be used for a variety of applications, including smart paint and…

Emerging Technologies · Computer Science 2017-10-24 Alexandra Porter , Andréa W. Richa

This survey highlights the recent advances in algorithms for numerical linear algebra that have come from the technique of linear sketching, whereby given a matrix, one first compresses it to a much smaller matrix by multiplying it by a…

Data Structures and Algorithms · Computer Science 2015-02-11 David P. Woodruff