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The contribution to an organism's phenotype from one genetic locus may depend upon the status of other loci. Such epistatic interactions among loci are now recognized as fundamental to shaping the process of adaptation in evolving…

Populations and Evolution · Quantitative Biology 2012-12-18 Jeremy A. Draghi , Joshua B. Plotkin

We propose a model of inference and heuristic decision-making in groups that is rooted in the Bayes rule but avoids the complexities of rational inference in partially observed environments with incomplete information, which are…

Multiagent Systems · Computer Science 2016-11-04 M. Amin Rahimian , Ali Jadbabaie

The environment has a strong influence on a population's evolutionary dynamics. Driven by both intrinsic and external factors, the environment is subject to continual change in nature. To capture an ever-changing environment, we consider a…

Populations and Evolution · Quantitative Biology 2022-02-18 Qi Su , Alex McAvoy , Long Wang , Martin A. Nowak

The paper studies the emergence and stability of cooperative behavior in populations of agents who interact among themselves in Prisoner's Dilemma games and who are allowed to choose their partners. The population is then subject to…

Disordered Systems and Neural Networks · Physics 2007-05-23 Pawel Sobkowicz

Cooperative behaviors are defined as the production of common goods benefitting all members of the community at the producer's cost. They could seem to be in contradiction with natural selection, as non-cooperators have an increased fitness…

Populations and Evolution · Quantitative Biology 2014-03-17 Bahram Houchmandzadeh

We show that the success of cooperation in an evolutionary prisoner's dilemma on a complex network can be predicted by a simple, quantitative network analysis using mean field parameters. The criterion is shown to be accurate on a wide…

Physics and Society · Physics 2009-08-27 Stephen Devlin , Thomas Treloar

In spite of its relevance to the origin of complex networks, the interplay between form and function and its role during network formation remains largely unexplored. While recent studies introduce dynamics by considering rewiring processes…

Physics and Society · Physics 2008-07-18 J. Poncela , J. Gomez-Gardenes , L. M. Floria , A. Sanchez , Y. Moreno

In Evolutionary Dynamics the understanding of cooperative phenomena in natural and social systems has been the subject of intense research during decades. We focus attention here on the so-called "Lattice Reciprocity" mechanisms that…

Physics and Society · Physics 2009-11-13 L. M. Floria , C. Gracia-Lazaro , J. Gomez-Gardenes , Y. Moreno

In the world, in which acceptance and the identification with social communities are highly desired, the ability to predict evolution of groups over time appears to be a vital but very complex research problem. Therefore, we propose a new,…

Social and Information Networks · Computer Science 2019-11-05 Stanisław Saganowski , Piotr Bródka , Michał Koziarski , Przemysław Kazienko

Levels of sociality in nature vary widely. Some species are solitary; others live in family groups; some form complex multi-family societies. Increased levels of social interaction can allow for the spread of useful innovations and…

Physics and Society · Physics 2023-01-11 Daniel B. Cooney , Dylan H. Morris , Simon A. Levin , Daniel I. Rubenstein , Pawel Romanczuk

We study the evolution of cooperation as a birth-death process in spatially extended populations. The benefit from the altruistic behavior of a cooperator is implemented by decreasing the death rate of its direct neighbors. The cost of…

Populations and Evolution · Quantitative Biology 2020-04-14 Konstantin Klemm , Nagi Khalil

We introduce a model, based on the Evolutionary Game Theory, for studying the dynamics of group formation. The latter constitutes a relevant phenomenon observed in different animal species, whose individuals tend to cluster together forming…

Populations and Evolution · Quantitative Biology 2018-02-07 Marco Alberto Javarone , Daniele Marinazzo

Which factors govern the evolution of mutation rates and emergence of species? Here, we address this question using a first principles model of life where population dynamics of asexual organisms is coupled to molecular properties and…

Populations and Evolution · Quantitative Biology 2009-11-13 Muyoung Heo , Louis Kang , Eugene I. Shakhnovich

Based on the adiabatic theory for the evolutionary minority game (EMG) that we proposed earlier[1], we perform a detail analysis of the EMG limited to three groups of agents. We derive a formula for the critical point of the transition from…

Statistical Mechanics · Physics 2009-11-10 Kan Chen , Bing-Hong Wang , Baosheng Yuan

The evolution of cooperative behaviour is studied in the deterministic version of the Prisoners' Dilemma on a two-dimensional lattice. The payoff parameter is set at the critical region $1.8 < b < 2.0$ , where clusters of cooperators are…

Nuclear Theory · Physics 2009-10-28 Zhen Cao , Rudolph C. Hwa

Evolutionary processes proved very useful for solving optimization problems. In this work, we build a formalization of the notion of cooperation and competition of multiple systems working toward a common optimization goal of the population…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Mark Burgin , Eugene Eberbach

A group of non-cooperating agents can succumb to the \emph{tragedy-of-the-commons} if all of them seek to maximize the same resource channel to improve their viability. In nature, however, groups often avoid such collapses by…

Multiagent Systems · Computer Science 2026-04-02 Siddharth Chaturvedi , Ahmed El-Gazzar , Marcel van Gerven

Evolutionary graph theory is a well established framework for modelling the evolution of social behaviours in structured populations. An emerging consensus in this field is that graphs that exhibit heterogeneity in the number of connections…

Populations and Evolution · Quantitative Biology 2018-11-20 Wes Maciejewski , Feng Fu , Christoph Hauert

How producers of public goods persist in microbial communities is a major question in evolutionary biology. Cooperation is evolutionarily unstable, since cheating strains can reproduce quicker and take over. Spatial structure has been shown…

Populations and Evolution · Quantitative Biology 2018-05-28 Gurdip Uppal , Dervis Can Vural

The optimal dimensional synthesis for planar mechanisms using differential evolution (DE) is demonstrated. Four examples are included: in the first case, the synthesis of a mechanism for hybrid-tasks, considering path generation, function…

Computational Engineering, Finance, and Science · Computer Science 2015-03-18 F. Penunuri , R. Peon-Escalante , C. Villanueva , D. Pech-Oy