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Different aspects of protein folding are illustrated by simplified polymer models. Stressing the diversity of side chains (residues) leads one to view folding as the freezing transition of an heteropolymer. Technically, the most common…

Soft Condensed Matter · Physics 2007-05-23 T. Garel

Understanding the yielding of glass-forming systems upon shearing is notoriously difficult since it is a strong non-equilibrium effect. Here we show that the concept of the potential energy landscape (PEL), developed for the quiescent…

Soft Condensed Matter · Physics 2018-09-26 Markus Blank-Burian , Andreas Heuer

We present a hybrid lattice Boltzmann algorithm for the simulation of flow glass-forming fluids, characterized by slow structural relaxation, at the level of the Navier-Stokes equation. The fluid is described in terms of a nonlinear…

Soft Condensed Matter · Physics 2015-04-24 S. Papenkort , Th. Voigtmann

The effect of cyclic loading on relaxation dynamics and mechanical properties of metallic glasses is studied using molecular dynamics simulations. We consider the Kob-Andersen three-dimensional binary mixture rapidly cooled across the glass…

Soft Condensed Matter · Physics 2018-07-09 Nikolai V. Priezjev

Recent theoretical investigations have indicated that rapid optical cycling should be feasible in complex polyatomic molecules with diverse constituents, geometries and symmetries. However, as a composite molecular mass grows, so does the…

Atomic Physics · Physics 2020-12-18 Konrad Wenz , Ivan Kozyryev , Rees L. McNally , Leland Aldridge , Tanya Zelevinsky

The dynamics of randomly crosslinked liquids is addressed via a Rouse- and a Zimm-type model with crosslink statistics taken either from bond percolation or Erdoes-Renyi random graphs. While the Rouse-type model isolates the effects of the…

Soft Condensed Matter · Physics 2007-05-23 Henning Löwe , Peter Müller , Annette Zippelius

Viscoelastic and thermodynamic properties of transient gels comprised of telechelic polymers are theoretically studied. We extend classical theories of transient networks so that correlations among polymer chains through the network…

Soft Condensed Matter · Physics 2009-11-11 Tsutomu Indei

The atomic structure of the supercooled liquid has often been discussed as a key source of glass formation in metals. The presence of icosahedrally-coordinated clusters and their tendency to form networks have been identified as one…

Materials Science · Physics 2013-10-30 Logan Ward , Dan Miracle , Wolfgang Windl , Oleg Senkov , Katharine Flores

The polymer systems are discussed in the framework of the Landau-Ginzburg model. The model is derived from the mesoscopic Edwards hamiltonian via the conditional partition function. We discuss flexible, semiflexible and rigid polymers. The…

Condensed Matter · Physics 2007-05-23 Robert Holyst , T. A. Vilgis

We consider the gelation of particles which are permanently connected by random crosslinks, drawn from an ensemble of finite-dimensional continuum percolation. To average over the randomness, we apply the replica trick, and interpret the…

Soft Condensed Matter · Physics 2009-11-07 Kurt Broderix , Martin Weigt , Annette Zippelius

A thermodynamic approach to derive the liquid-glass transition line in the reduced temperature vs reduced density plane for a monatomic Lennard-Jones fluid is presented. The approach makes use of a recent reformulation of the classical…

Statistical Mechanics · Physics 2009-11-07 M. Robles , M. López de Haro

Usually, the strain-induced softening behaviour observed in the differential modulus $K(T,\gamma)$ of hydrogels has been attributed to the breakage of internal structures of the network, such as the cross-links that bind together the…

Soft Condensed Matter · Physics 2025-01-07 L. K. R. Duarte , L. G. Rizzi

A directed polymer is considered on a flat substrate with randomly located parallel ridges. It prefers to lie inside wide regions between the ridges. When the transversel width $W=\exp(\lambda L^{1/3})$ is exponential in the longitudinal…

Disordered Systems and Neural Networks · Physics 2009-10-30 Th. M. Nieuwenhuizen

Among the outstanding problems in the theory of supercooled liquids are the reasons for the rapid increase in their viscosity and relaxation times as the temperature is lowered towards the glass transition temperature, the non-exponential…

Disordered Systems and Neural Networks · Physics 2015-06-25 V. Halpern

We present Molecular Dynamics simulations of the thermal glass transition in a dense model polymer liquid. We performed a comparative study of both constant volume and constant pressure cooling of the polymer melt. Great emphasis was laid…

Statistical Mechanics · Physics 2009-10-30 C. Bennemann , W. Paul , K. Binder , B. Duenweg

A theory of drop-wise addition polymerization is developed. Because of the linear growth of the reaction volume V, the system gives rise to a new type of distribution function for cyclic species that can be expressed by the sum of two…

Soft Condensed Matter · Physics 2007-06-01 Kazumi Suematsu

We report results of molecular-dynamics simulations for a glassy polymer melt consisting of short, linear bead-spring chains. It was shown in previous work that this onset of the glassy slowing down is compatible with the predictions of the…

Soft Condensed Matter · Physics 2009-10-31 C. Bennemann , J. Baschnagel , W. Paul , K. Binder

We theoretically investigate the glass-transition problem for a quasi-two-dimensional colloidal dense suspension modulated by a one-dimensional periodic external potential as imposed by interfering laser beams. Relying on a mode-coupling…

Soft Condensed Matter · Physics 2025-09-10 Abolfazl Ahmadirahmat , Michele Caraglio , Vincent Krakoviack , Thomas Franosch

A Monte Carlo method is used in order to simulate the competition between the molecular relaxation and crystallization times in the formation of a glass. The results show that nucleation is avoided during supercooling and produce…

Disordered Systems and Neural Networks · Physics 2009-11-07 Adrian Huerta , Gerardo G. Naumis

A theoretical model of electromigrative, diffusive and convectivetransport polymer-gel composites is presented. Bulk properties are derived from the standard electrokinetic model with an impenetrable charged sphere embedded in an…

Soft Condensed Matter · Physics 2007-05-23 Reghan J. Hill
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