Related papers: Why is the DNA Denaturation Transition First Order…
An end-grafted flexible polymer chain in 3d space between two pistons undergoes an abrupt transition from a confined coil to a flower-like conformation when the number of monomers in the chain, N, reaches a critical value. In 2d geometry,…
First order quantum phase transition (QPT) between spherical and axially deformed nuclei shows coexisting, but well-separated regions of regular and chaotic dynamics. We employ a Hamiltonian of the Arima-Iachello Interacting Boson Model…
Living cells provide a fluctuating, out-of-equilibrium environment in which genes must coordinate cellular function. DNA looping, which is a common means of regulating transcription, is very much a stochastic process; the loops arise from…
DNA has a well-defined structural transition -- the denaturation of its double-stranded form into two single strands -- that strongly affects its thermal transport properties. We show that, according to a widely implemented model for DNA…
The cellular cytoplasm is organized into compartments. Phase separation is a simple manner to create membrane-less compartments in order to confine and localize particles like proteins. In many cases these particles are bound to fluctuating…
The phenomenon of distinct behaviors exhibited by neural networks under varying scales of initialization remains an enigma in deep learning research. In this paper, based on the earlier work by Luo et al.~\cite{luo2021phase}, we present a…
Homogeneous nucleation of a new phase near a second, continuous, transition, is considered. The continuous transition is in the metastable region associated with the first-order phase transition, one of whose coexisting phases is…
Structural changes in giant DNA induced by the addition of the flexible polymer PEG were examined by the method of single-DNA observation. In dilute DNA conditions, individual DNA assumes a compact state via a discrete coil-globule…
Using a combination of the mean-field Bogoliubov deGennes (BdG) approach and the Density Matrix Renormalization Group (DMRG) method, we discover first order topological transitions between topological superconducting and trivial insulating…
We prove that various SO(n)-invariant n-vector models with interactions which have a deep and narrow enough minimum have a first-order transition in the temperature. The result holds in dimension two or more, and is independent on the…
This work reports deep-learning-unique first-order and second-order phase transitions, whose phenomenology closely follows that in statistical physics. In particular, we prove that the competition between prediction error and model…
Bose condensed light can form new phases [1] in a dye filled cavity due to the presence of the orientational disorder created by dye molecules which are essentially frozen on the time scale of the photonic thermalization (few ps). At longer…
We investigate the transition from second to first order systems. This transforms configuration space into phase space and hence introduces noncommutativity in the former. Quantum mechanically, the transition may be described in terms of…
The succession of suggested mechanisms of solid-state phase transitions - Second-order, Lambda, Martensitic, Displacive, Topological, Order-Disorder, Soft-mode, Incommensurate, Scaling and Quantum - are analyzed and explained why they…
We study secondary structures of random RNA molecules by means of a renormalized field theory based on an expansion in the sequence disorder. We show that there is a continuous phase transition from a molten phase at higher temperatures to…
Single molecule experiments on B-DNA stretching have revealed one or two structural transitions, when increasing the external force. They are characterized by a sudden increase of DNA contour length and a decrease of the bending rigidity.…
The scaling properties of DNA knots of different complexities were studied by atomic force microscope. Following two different protocols DNA knots are adsorbed onto a mica surface in regimes of (i) strong binding, that induces a kinetic…
The behavior of long DNA molecules in a cell-sized confined space was investigated. We prepared water-in-oil droplets covered by phospholipids, which mimic the inner space of a cell, following the encapsulation of DNA molecules with…
We consider first-order phase transitions of the Universe in the radiation-dominated era. We argue that in general the velocity of interfaces is non-relativistic due to the interaction with the plasma and the release of latent heat. We…
The transition from the quantum to the classical regime of the nucleation of the closed Robertson-Walker Universe with spacially homogeneous matter fields is investigated with a perturbation expansion around the sphaleron configuration. A…