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The analysis of extensive numerical data for the percolation probabilities of incipient spanning clusters in two dimensional percolation at criticality are presented. We developed an effective code for the single-scan version of the…

Statistical Mechanics · Physics 2007-05-23 Lev N. Shchur

We present a Markov Chain Monte Carlo algorithm based on the Metropolis algorithm for simulation of the flow of two immiscible fluids in a porous medium under macroscopic steady-state conditions using a dynamical pore network model that…

Fluid Dynamics · Physics 2016-12-20 Isha Savani , Santanu Sinha , Alex Hansen , Dick Bedeaux , Signe Kjelstrup , Morten Vassvik

A grand canonical Monte Carlo (MC) algorithm is presented for studying the lattice gas model (LGM) of multiple protein sequence alignment, which coherently combines long-range interactions and variable-length insertions. MC simulations are…

Biomolecules · Quantitative Biology 2017-07-13 Akira R. Kinjo

We introduce a bond percolation procedure on a $D$-dimensional lattice where two neighbouring sites are connected by $N$ channels, each operated by valves at both ends. Out of a total of $N$, randomly chosen $n$ valves are open at every…

Statistical Mechanics · Physics 2011-05-16 Urna Basu , Mahashweta Basu , Anasuya Kundu , P. K. Mohanty

The present work introduces an efficient Monte Carlo algorithm for continuum percolation composed of randomly-oriented rectangles. By conducting extensive simulations, we report high precision percolation thresholds for a variety of…

Data Analysis, Statistics and Probability · Physics 2016-04-06 Jiantong Li , Mikael Östling

We introduce a scalable searching algorithm for finding nodes and contents in random networks with Power-Law (PL) and heavy-tailed degree distributions. The network is searched using a probabilistic broadcast algorithm, where a query…

Disordered Systems and Neural Networks · Physics 2007-05-23 Nima Sarshar , P. Oscar Boykin , Vwani P. Roychowdhury

We study site percolation on lattices confined to a semi-infinite strip. For triangular and square lattices we find that the probability that a cluster touches the three sides of such a system at the percolation threshold has the continuous…

Statistical Mechanics · Physics 2019-10-23 Zbigniew Koza

We prove a remarkable combinatorial symmetry in the number of spanning configurations in site percolation: for a large class of lattices, the number of spanning configurations with an odd or even number of occupied sites differs by $\pm 1$.…

Statistical Mechanics · Physics 2019-12-11 Stephan Mertens , Cristopher Moore

The computational cost of a Monte Carlo algorithm can only be meaningfully discussed when taking into account the magnitude of the resulting statistical error. Aiming for a fixed error per particle, we study the scaling behavior of the…

Computational Physics · Physics 2010-02-11 Norbert Nemec

In this article, we revisit random site and bond percolation in square lattice focusing primarily on the behavior of entropy and order parameter. In the case of traditional site percolation, we find that both the quantities are zero at…

Statistical Mechanics · Physics 2019-12-10 M. S. Rahman , M. K. Hassan

We investigate the attractive Fermi polaron problem in two dimensions using non-perturbative Monte Carlo simulations. We introduce a new Monte Carlo algorithm called the impurity lattice Monte Carlo method. This algorithm samples the path…

Quantum Gases · Physics 2015-10-29 Shahin Bour , Dean Lee , H. -W. Hammer , Ulf-G. Meißner

Communication networks, power grids, and transportation networks are all examples of networks whose performance depends on reliable connectivity of their underlying network components even in the presence of usual network dynamics due to…

Physics and Society · Physics 2020-06-26 Arman Mohseni-Kabir , Mihir Pant , Don Towsley , Saikat Guha , Ananthram Swami

We present two Monte Carlo sampling algorithms for probabilistic inference that guarantee polynomial-time convergence for a larger class of network than current sampling algorithms provide. These new methods are variants of the known…

Artificial Intelligence · Computer Science 2013-02-18 Malcolm Pradhan , Paul Dagum

In a recent article, one of the authors used $c=0$ logarithmic conformal field theory to predict crossing-probability formulas for percolation clusters inside a hexagon with free boundary conditions. In this article, we verify these…

Statistical Mechanics · Physics 2015-06-22 Steven M. Flores , Robert M. Ziff , Jacob J. H. Simmons

We investigate the effect of structural distortion on bond percolation in simple cubic and body-centered cubic lattices using extensive Monte Carlo simulations. Distortion is introduced through controlled random displacements of lattice…

Statistical Mechanics · Physics 2026-02-18 Bishnu Bhowmik , Sayantan Mitra , Robert M. Ziff , Ankur Sensharma

We study the onset of the bootstrap percolation transition as a model of generalized dynamical arrest. We develop a new importance-sampling procedure in simulation, based on rare events around "holes", that enables us to access bootstrap…

Statistical Mechanics · Physics 2009-11-10 Paolo De Gregorio , Aonghus Lawlor , Phil Bradley , Kenneth A. Dawson

Bootstrap percolation on a graph iteratively enlarges a set of occupied sites by adjoining points with at least $\theta$ occupied neighbors. The initially occupied set is random, given by a uniform product measure, and we say that spanning…

Probability · Mathematics 2015-05-14 Janko Gravner , David Sivakoff

Droplet nucleation and evaporation are ubiquitous in nature and many technological applications, such as phase-change cooling and boiling heat transfer. So far, the description of these phenomena at the molecular scale has posed challenges…

Fluid Dynamics · Physics 2023-11-28 Panagiotis E. Theodorakis , Y. Wang , A. Chen , B. Liu

A crossing probability for the critical four-state Potts model on an $L\times M$ rectangle on a square lattice is numerically studied. The crossing probability here denotes the probability that spin clusters cross from one side of the…

Statistical Mechanics · Physics 2019-10-01 Kimihiko Fukushima , Kazumitsu Sakai

Chase-escape percolation is a variation of the standard epidemic spread models. In this model, each site can be in one of three states: unoccupied, occupied by a single prey, or occupied by a single predator. Prey particles spread to…

Statistical Mechanics · Physics 2021-06-02 Aanjaneya Kumar , Peter Grassberger , Deepak Dhar