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We use numerical simulations to show how a fully flexible filament binding to a deformable cylindrical surface may acquire a macroscopic persistence length and a helical conformation. This is a result of the nontrivial elastic response to…

Soft Condensed Matter · Physics 2015-03-17 Andela Šarić , Josep C. Pàmies , Angelo Cacciuto

In polymer melts, the interaction between segments are considered to be screened and the ideal Gaussian chain statistics is recovered. The experimental fact that linear viscoelasticity of unentangled polymers can be well described by the…

Soft Condensed Matter · Physics 2021-04-28 Takashi Uneyama

Constant temperature molecular dynamics simulations were used to study solutions of flexible polyelectrolyte chains at nonzero concentrations with explicit counterions and unscreened coulombic interactions. Counterion condensation, measured…

Statistical Mechanics · Physics 2009-10-31 J. C. Chu , C. H. Mak

A mesoscopic model of amorphous plasticity is discussed in the context of depinning models. After embedding in a d + 1 dimensional space, where the accumulated plastic strain lives along the additional dimension, the gradual plastic…

Soft Condensed Matter · Physics 2016-07-06 Botond Tyukodi , Sylvain Patinet , Stéphane Roux , Damien Vandembroucq

Semiflexible polymers form central structures in biological material. Modeling approaches usually neglect influences of polymer-specific molecular features aiming to describe semiflexible polymers universally. Here, we investigate the…

The effective quasistatic conductivity of composite polymeric electrolytes is studied in terms of a hard-core--penetrable-layer model. Used to incorporate the interface phenomena (such as amorphization of the polymer matrix around filler…

Materials Science · Physics 2019-11-05 M. Ya. Sushko , A. K. Semenov

The flexibility of short DNA fragments is studied by a Hamiltonian model which treats the inter-strand and intra-strand forces at the level of the base pair. The elastic response of a set of homogeneous helices to externally applied forces…

Biomolecules · Quantitative Biology 2016-06-30 Marco Zoli

We investigate a system of dense polyelectrolytes in solution. The Langevin dynamics of the system with linearized hydrodynamics is formulated in the functional integral formalism and a transformation made to collective coordinates. Within…

Soft Condensed Matter · Physics 2015-06-25 Kristian K. M"uller-Nedebock , Thomas A. Vilgis

Conjugated polymers are observed to aggregate in solution. To account for this observation we propose a inter-chain binding mechanism based on the intermolecular tunneling of the delocalized $\pi$-electrons occurring at points where the…

Soft Condensed Matter · Physics 2013-05-29 Jeremy D. Schmit , Alex J. Levine

Motivated by the observation of the storage of excess elastic free energy - (prestress) -- in cross linked semiflexible networks, we consider the problem of the conformational statistics of a single semiflexible polymer in a quenched random…

Soft Condensed Matter · Physics 2019-04-10 Valentin M. Slepukhin , Maximilian J. Grill , Kei W. Müller , Wolfgang A. Wall , Alex J. Levine

We study the effective interaction between differently charged polyelectrolyte-colloid complexes in electrolyte solutions via Monte Carlo simulations. These complexes are formed when short and flexible polyelectrolyte chains adsorb onto…

Soft Condensed Matter · Physics 2010-05-05 D. Truzzolillo , F. Bordi , F. Sciortino , S. Sennato

Many charged polymers, including nucleic acids, are locally stiff. Their bending rigidity -- quantified by the persistence length --, depends crucially on Coulombic features, such as the ionic strength of the solution which offers a…

Soft Condensed Matter · Physics 2016-12-21 E. Trizac , T. Shen

We derive scaling relations for the extension statistics and the confinement free energy for a semi-flexible polymer confined to a channel with a rectangular cross-section. Our motivation are recent numerical results [Gupta {\em et al.},…

Soft Condensed Matter · Physics 2015-05-19 E. Werner , B. Mehlig

Recent experimental observations of anisotropic conductivity in stretched polymer electrolytes films of the polyethylene oxide family are discussed. The main experimental observations, enhancement of the ionic diffusion and conductivity in…

Soft Condensed Matter · Physics 2007-05-23 Oliver Duerr , Wolfgang Dieterich , Philipp Maas , Abraham Nitzan

Inspired by recent experiments on chromosomal dynamics, we introduce an exactly solvable model for the interaction between a flexible polymer and a set of motor-like enzymes. The enzymes can bind and unbind to specific sites of the polymer…

Soft Condensed Matter · Physics 2019-04-03 Stefanie Put , Takahiro Sakaue , Carlo Vanderzande

Extensional rheometry and Brownian Dynamics simulations of flexible polymer solutions confirm predictions based on blob concepts that coil--stretch hysteresis in extensional flows increases with concentration, reaching a maximum at the…

Soft Condensed Matter · Physics 2020-07-03 Ranganathan Prabhakar , Chandi Sasmal , Duc At Nguyen , Tam Sridhar , J. Ravi Prakash

A microscopic model of a surface polymer network - membrane system is introduced, with contact polymer surface interactions that can be either repulsive or attractive and sliplinks of functionality four randomly distributed over the…

Condensed Matter · Physics 2016-08-31 R. Podgornik

It has become clear in recent years that the simple uniform wormlike chain model needs to be modified in order to account for more complex behavior which has been observed experimentally in some important biopolymers. For example, the large…

Soft Condensed Matter · Physics 2017-11-01 Panayotis Benetatos

Motivated by the recent experimental developments in van der Waals heterostructures, we investigate the emergent magnetism in Mott insulator - semimetal moir\'e superlattices by deriving effective spin models and exploring their phase…

Strongly Correlated Electrons · Physics 2024-11-05 M. A. Keskiner , Pouyan Ghaemi , M. Ö. Oktel , Onur Erten

Self-healing polymers crosslinked by solely reversible bonds are intrinsically weaker than common covalently crosslinked networks. Introducing covalent crosslinks into a reversible network would improve mechanical strength. It is…

Materials Science · Physics 2021-09-13 Jinrong Wu , Li-Heng Cai , David A. Weitz