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A quantitative understanding of how cells interact with their extracellular matrix via molecular bonds is fundamental for many important processes in cell biology and engineering. In these interactions, the deformability of cells and matrix…

Biological Physics · Physics 2022-07-13 Qiangzeng Huang , Jizeng Wang

This paper devotes to formulating several multiscale models to study the effect of pH-dependent ionic inhomogeneity on the electrical potential distributions and the graded elastic properties of a nanoscale DNA film and the related bending…

Applied Physics · Physics 2017-06-27 Neng-Hui Zhang , Wei-Lie Meng , Cheng-Yin Zhang , Jun-Zheng Wu

In the perspective of developing smart hybrid materials with customized features, ferrogels and magnetorheological elastomers allow a synergy of elasticity and magnetism. The interplay between elastic and magnetic properties gives rise to a…

Soft Condensed Matter · Physics 2016-10-12 Giorgio Pessot , Hartmut Löwen , Andreas M. Menzel

A self-consistent mode-coupling theory is presented for the viscosity of solutions of charged rod-like polymers. The static structure factor used in the theory is obtained from polymer integral equation theory; the Debye-H\"{u}ckel…

Soft Condensed Matter · Physics 2009-11-10 Kunimasa Miyazaki , Biman Bagchi , Arun Yethiraj

We study two aspects of the elasticity of smectic-$A$ elastomers that make these materials genuinely and qualitatively different from conventional uniaxial rubbers. Under strain applied parallel to the layer normal, monodomain smectic-$A$…

Soft Condensed Matter · Physics 2009-11-13 Olaf Stenull , T. C. Lubensky

We review the physical properties of macromolecular networks, consisting of semiflexible polymers such as actin. We start by giving a theoretical analysis of the conformational statistics and mechanical response of single filaments.…

Soft Condensed Matter · Physics 2008-02-03 Erwin Frey , Klaus Kroy , Jan Wilhelm , Erich Sackmann

We develop a model for gels and entangled solutions of semiflexible biopolymers such as F-actin. Such networks play a crucial structural role in the cytoskeleton of cells. We show that the rheologic properties of these networks can result…

Condensed Matter · Physics 2009-10-28 F. C. MacKintosh , J. Kas , P. A. Janmey

Simple expressions for the bending and the base-stacking energy of double-stranded semiflexible biopolymers (such as DNA and actin) are derived. The distribution of the folding angle between the two strands is obtained by solving a…

Soft Condensed Matter · Physics 2009-10-31 Zhou Haijun , Ou-Yang Zhong-can

The persistence length of semiflexible polymers and one-dimensional fluid membranes is obtained from the renormalization of their bending rigidity. The renormalized bending rigidity is calculated using an exact real-space functional…

Statistical Mechanics · Physics 2012-05-02 Petra Gutjahr , Reinhard Lipowsky , Jan Kierfeld

Hydrodynamic interactions (HI) between segments of a polymer have long been known to strongly affect polymer stretching in laminar viscometric flows. Yet the role of HI in fluctuating turbulent flows remains unclear. Using Brownian dynamics…

Soft Condensed Matter · Physics 2026-05-18 Aditya Ganesh , Dario Vincenzi , Ranganathan Prabhakar , Jason R. Picardo

We study the effect of electrostatic interactions on the distribution function of the end-to-end distance of a single polyelectrolyte chain in the rodlike limit. The extent to which the radial distribution function of a polyelectrolyte is…

Soft Condensed Matter · Physics 2009-11-10 Roya Zandi , Joseph Rudnick , Ramin Golestanian

We elucidate the elastic behavior of a wormlike chain in 3D under compression and provide exact solutions for the experimentally accessible force-extension relation in terms of generalized spheroidal wave functions. In striking contrast to…

Soft Condensed Matter · Physics 2019-11-11 Christina Kurzthaler

In this paper, we study the long time behaviour of the Fokker-Planck and the kinetic Fokker-Planck equations with many body interaction, more precisely with interaction defined by U-statistics, whose macroscopic limits are often called…

Analysis of PDEs · Mathematics 2023-06-05 Mohamed Alfaki Ag Aboubacrine Assadeck

We investigate the stretching response of a thick polymer model by means of extensive stochastic simulations. The computational results are synthesized in an analytic expression that characterizes how the force versus elongation curve…

Soft Condensed Matter · Physics 2009-11-11 Ngo Minh Toan , Davide Marenduzzo , Cristian Micheletti

We derive a Debye-H\"uckel-like model of the electric ion-ion interaction for non-constant dielectric susceptibility, which does not depend on any kind of charging process due to its foundation in the general framework of non-equilibrium…

Chemical Physics · Physics 2025-02-24 Wolfgang Dreyer , Rüdiger Müller

We present a study of the bend angle distribution of semiflexible polymers of short and intermediate lengths within the wormlike chain model. This enables us to calculate the elastic response of a stiff molecule to a bending moment. Our…

Soft Condensed Matter · Physics 2015-06-12 Anirban Polley , Joseph Samuel , Supurna Sinha

Biological cells in soft materials can be modeled as anisotropic force contraction dipoles. The corresponding elastic interaction potentials are long-ranged ($\sim 1/r^3$ with distance $r$) and depend sensitively on elastic constants,…

Soft Condensed Matter · Physics 2009-11-07 U. S. Schwarz , S. A. Safran

The elastic moduli of four numerical random isotropic packings of Hertzian spheres are studied. The four samples are assembled with different preparation procedures, two of which aim to reproduce experimental compaction by vibration and…

Materials Science · Physics 2007-11-19 I. Agnolin , J. -N. Roux

The behavior of a non-conductive quasi-planar lipid membrane in an electrolyte and in a static (DC) electric field is investigated theoretically in the nonlinear (Poisson-Boltzmann) regime. Electrostatic effects due to charges in the…

Soft Condensed Matter · Physics 2015-05-18 Falko Ziebert , David Lacoste

Elastic properties and internal states of isotropic sphere packings are studied by numerical simulations. Several numerical protocols to assemble dense configurations are compared. One, which imitates experiments with lubricated contacts,…

Materials Science · Physics 2009-01-16 Ivana Agnolin , Jean-Noël Roux