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Recently, deep neural networks have expanded the state-of-art in various scientific fields and provided solutions to long standing problems across multiple application domains. Nevertheless, they also suffer from weaknesses since their…

Machine Learning · Computer Science 2023-05-03 Felipe Kenji Nakano , Konstantinos Pliakos , Celine Vens

Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…

Quantitative Methods · Quantitative Biology 2016-03-08 Cedric Chauve , Julien Courtiel , Yann Ponty

The notion of transducer integer sequences is considered through a series of examples. By definition, transducer integer sequences are integer sequences produced, under a suitable interpretation, by finite automata encoding tree morphisms…

Combinatorics · Mathematics 2007-05-23 Zoran Sunic

This paper presents Tree Notation, a new simple, universal syntax. Language designers can invent new programming languages, called Tree Languages, on top of Tree Notation. Tree Languages have a number of advantages over traditional…

Programming Languages · Computer Science 2017-10-25 Breck Yunits

The palindromic tree (a.k.a. eertree) is a data structure that provides access to all palindromic substrings of a string. In this paper, we propose a dynamic version of eertree, called double-ended eertree, which supports online operations…

Data Structures and Algorithms · Computer Science 2025-11-25 Qisheng Wang , Ming Yang , Xinrui Zhu

Representing a proof tree by a combinator term that reduces to the tree lets subtle forms of duplication within the tree materialize as duplicated subterms of the combinator term. In a DAG representation of the combinator term these…

Logic in Computer Science · Computer Science 2022-09-27 Christoph Wernhard

We present a new overlay, called the {\em Deterministic Decentralized tree} ($D^2$-tree). The $D^2$-tree compares favourably to other overlays for the following reasons: (a) it provides matching and better complexities, which are…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-03-09 G. S. Brodal , S. Sioutas , K. Tsichlas , C. Zaroliagis

The subtrees and BC-subtrees (subtrees where any two leaves are at even distance apart) have been extensively studied in recent years. Such structures, under special constraints on degrees, have applications in many fields. Through an…

Combinatorics · Mathematics 2021-10-08 Yu Yang , Xiao-xiao Li , Meng-yuan Jin , Long Li , Hua Wang , Xiao-Dong Zhang

Although current CCG supertaggers achieve high accuracy on the standard WSJ test set, few systems make use of the categories' internal structure that will drive the syntactic derivation during parsing. The tagset is traditionally truncated,…

Computation and Language · Computer Science 2020-12-14 Jakob Prange , Nathan Schneider , Vivek Srikumar

Decision tree (DT) attracts persistent research attention due to its impressive empirical performance and interpretability in numerous applications. However, the growth of traditional yet widely-used univariate decision trees (UDTs) is…

Machine Learning · Computer Science 2022-06-22 Dan Li , Songcan Chen

Deep learning has demonstrated its strengths in numerous binary analysis tasks, including function boundary detection, binary code search, function prototype inference, value set analysis, etc. When applying deep learning to binary analysis…

Machine Learning · Computer Science 2021-09-15 Xuezixiang Li , Qu Yu , Heng Yin

Large language models often struggle with complex long-horizon analytical tasks over unstructured tables, which typically feature hierarchical and bidirectional headers and non-canonical layouts. We formalize this challenge as Deep Tabular…

Artificial Intelligence · Computer Science 2026-03-13 Junnan Dong , Chuang Zhou , Zheng Yuan , Yifei Yu , Qiufeng Wang , Yinghui Li , Siyu An , Di Yin , Xing Sun , Feiyue Huang

XML document markup is highly repetitive and therefore well compressible using dictionary-based methods such as DAGs or grammars. In the context of selectivity estimation, grammar-compressed trees were used before as synopsis for structural…

Databases · Computer Science 2010-12-30 Sebastian Maneth , Tom Sebastian

Neural networks (NNs) and decision trees (DTs) are both popular models of machine learning, yet coming with mutually exclusive advantages and limitations. To bring the best of the two worlds, a variety of approaches are proposed to…

Machine Learning · Computer Science 2022-09-09 Haoling Li , Jie Song , Mengqi Xue , Haofei Zhang , Jingwen Ye , Lechao Cheng , Mingli Song

Human language is known to exhibit a nested, hierarchical structure, allowing us to form complex sentences out of smaller pieces. However, many state-of-the-art neural networks models such as Transformers have no explicit hierarchical…

Computation and Language · Computer Science 2023-07-12 Nilay Patel , Jeffrey Flanigan

This paper introduces decorated merge trees (DMTs) as a novel invariant for persistent spaces. DMTs combine both $\pi_0$ and $H_n$ information into a single data structure that distinguishes filtrations that merge trees and persistent…

Algebraic Topology · Mathematics 2021-07-29 Justin Curry , Haibin Hang , Washington Mio , Tom Needham , Osman Berat Okutan

So far, a very large amount of work in Natural Language Processing (NLP) rely on trees as the core mathematical structure to represent linguistic informations (e.g. in Chomsky's work). However, some linguistic phenomena do not cope properly…

Computation and Language · Computer Science 2013-02-27 Guillaume Bonfante , Bruno Guillaume

The multilayer multiconfiguration time-dependent Hartree (ML-MCTDH) method and the density matrix renormalization group (DMRG) are powerful workhorses applied mostly in different scientific fields. Although both methods are based on tensor…

Chemical Physics · Physics 2024-09-05 Henrik R. Larsson

HyperBagGraphs (hb-graphs as short) extend hypergraphs by allowing the hyperedges to be multisets. Multisets are composed of elements that have a multiplicity. When this multiplicity has positive integer values, it corresponds to non…

Discrete Mathematics · Computer Science 2018-09-19 Xavier Ouvrard , Jean-Marie Le Goff , Stephane Marchand-Maillet

The M-tree is a paged, dynamically balanced metric access method that responds gracefully to the insertion of new objects. To date, no algorithm has been published for the corresponding Delete operation. We believe this to be non-trivial…

Databases · Computer Science 2010-04-27 Alan P. Sexton , Richard Swinbank
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