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The mitosis process of an eukaryotic cell can be represented by the structure constants of an evolution algebra. Any isotopism of the latter corresponds to a mutation of genotypes of the former. This paper uses Computational Algebraic…

Rings and Algebras · Mathematics 2019-01-08 Óscar J. Falcón , Raúl M. Falcón , Juan Núñez

The excitation of vibrational modes in molecules affects the outcome of chemical reactions, for example by providing molecules with sufficient energy to overcome activation barriers. In this work, we introduce a quantum algorithm for…

Quantum Physics · Physics 2021-12-01 Soran Jahangiri , Juan Miguel Arrazola , Nicolás Quesada , Alain Delgado

We analytically tackle opto-vibronic interactions in molecular systems driven by either classical or quantum light fields. In particular, we examine a simple model of molecules with two relevant electronic levels, characterized by potential…

Quantum Physics · Physics 2024-02-28 Q. Zhang , M. Asjad , M. Reitz , C. Sommer , B. Gurlek , C. Genes

The representation of the potential energy surfaces of atom molecule or molecular dimers interactions should account faithfully for the symmetry properties of the systems, preserving at the same time a compact analytical form. To this aim,…

We present a generalized equations-of-motion method that efficiently calculates energy spectra and matrix elements for algebraic models. The method is applied to a 5-dimensional quartic oscillator that exhibits a quantum phase transition…

Nuclear Theory · Physics 2008-11-26 S. Y. Ho , G. Rosensteel , D. J. Rowe

We propose an alternative to the usual time--independent Born--Oppenheimer approximation that is specifically designed to describe molecules with symmetrical Hydrogen bonds. In our approach, the masses of the Hydrogen nuclei are scaled…

Mathematical Physics · Physics 2015-06-26 George A. Hagedorn , Alain Joye

Accurately simulating molecular vibronic spectra remains computationally challenging due to the exponential scaling of required calculations. Here, we show that employing the linear coupling model within the gaussian boson sampling…

Quantum Physics · Physics 2025-08-07 I. Konyshev , R. Pradip , O. Page , C. Ünlüer , R. T. Nasibullin , V. V. Rybkin , W. Pernice , S. Ferrari

The fast dynamics of molecular polaritonics is scrutinized theoretically through the implementation of two-dimensional spectroscopy protocols. We derive conceptually simple and computationally efficient formulas to calculate two-dimensional…

Quantum Physics · Physics 2024-03-08 Daniela Gallego-Valencia , Lars Mewes , Johannes Feist , José Luis Sanz-Vicario

A new recursion procedure for deriving renormalized perturbation expansions for the one-dimensional anharmonic oscillator is offered. Based upon the $\hbar$-expansions and suitable quantization conditions, the recursion formulae obtained…

Quantum Physics · Physics 2009-11-07 I. V. Dobrovolska , R. S. Tutik

The vibrational behavior of molecules serves as a crucial fingerprint of their structure, chemical state, and surrounding environment. Neutron vibrational spectroscopy provides comprehensive measurements of vibrational modes without…

Chemical Physics · Physics 2025-02-19 Bowen Han , Pei Zhang , Kshitij Mehta , Massimiliano Lupo Pasini , Mingda Li , Yongqiang Cheng

A two-parameter deformation of the Lie algebra u$_2$ is used, in conjunction with the rotor system and the oscillator system, to generate a model for rotation-vibration spectroscopy of molecules and nuclei.

atom-ph · Physics 2008-02-03 R. Barbier , M. Kibler

The two-dimensional spectroscopy has recently revealed oscillatory behavior of excitation dynamics in molecular systems. However, in the majority of cases it is strongly debated if excitonic or vibrational wavepackets, or evidences of…

Chemical Physics · Physics 2012-11-27 Vytautas Butkus , Donatas Zigmantas , Leonas Valkunas , Darius Abramavicius

A random matrix model to describe the coupling of m-fold symmetry in constructed. The particular threefold case is used to analyze data on eigenfrequencies of elastomechanical vibration of an anisotropic quartz block. It is suggested that…

Data Analysis, Statistics and Probability · Physics 2007-11-18 J. X. Carvalho , M. S. Hussein , M. P. Pato , A. J. Sargeant

We show, through a machine learning approach, that the equilibrium distance, harmonic vibrational frequency, and binding energy of diatomic molecules are universally related. In particular, the relationships between spectroscopic constants…

Chemical Physics · Physics 2020-05-19 Xiangyue Liu , Gerard Meijer , Jesús Pérez-Ríos

Symmetry-determined nonlinear normal modes, which describe large-amplitude vibrations of diamond lattice, are studied by specific group-theoretical methods. For two of these modes, corresponding to vibrational state with and without…

Pattern Formation and Solitons · Physics 2018-11-16 George Chechin , Denis Ryabov , Stepan Shcherbinin

Molecular vibrations in solutions, especially OH stretching and bending in water, drive ultrafast energy relaxation and dephasing in chemical and biological systems. We present a machine learning approach for constructing system-bath models…

Chemical Physics · Physics 2026-03-18 Kwanghee Park , Ju-Yeon Jo , Yoshitaka Tanimura

We introduce a general approach for the simulation of quantum vibrational states of (symmetric and asymmetric) double-well potentials in molecules and materials for thermodynamic and spectroscopic applications. The method involves solving…

We extract the dynamics implicit in an algebraic fitted model Hamiltonian for the deuterium chromophore's vibrational motion in the molecule CDBrClF. The original model has 4 degrees of freedom, three positions and one representing…

Chemical Physics · Physics 2009-11-10 C. Jung , C. Mejia-Monasterio , H. S. Taylor

In this paper, we present the quadratic associative symmetry algebra of the 3D nondegenerate maximally quantum superintegrable system. This is the complete symmetry algebra of the system. It is demonstrated that the symmetry algebra…

Mathematical Physics · Physics 2022-07-25 Mohasena Ahamed , Md Fazlul Hoque

In many time-harmonic electromagnetic wave problems, the considered geometry exhibits an axial symmetry. In this case, by exploiting a Fourier expansion along the azimuthal direction, fully three-dimensional (3D) calculations can be carried…

Numerical Analysis · Mathematics 2022-11-22 Erik Schnaubelt , Nicolas Marsic , Herbert De Gersem
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