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We develop a macroscopic description of the evolutionary dynamics by following the temporal dynamics of the total Shannon entropy of sequences, denoted by $S$, and the average Hamming distance between them, denoted by $H$. We argue that a…

Populations and Evolution · Quantitative Biology 2024-02-23 Artem Romanenko , Vitaly Vanchurin

The research concerns the dynamics of complex autonomous Kauffman networks. The article defines and shows using simulation experiments half-chaotic networks, which exhibit features much more similar to typically modeled systems like a…

Adaptation and Self-Organizing Systems · Physics 2022-01-14 Andrzej Gecow

The possibility that a short-range interacting system exhibits nonadditivity is investigated. After the discussion on the precise definition of additivity and its consequence, we show that it is possible when the system is in a…

Statistical Mechanics · Physics 2015-06-19 Takashi Mori

The appearance of so-called exceptional points in the complex spectra of non-Hermitian systems is often associated with phenomena that contradict our physical intuition. One example of particular interest is the state-exchange process…

Here we present a simple stochastic threshold model consisting of a deterministic slowly decaying term and a fast stochastic noise term. The process shows a pseudo-resonance, in the sense that for small and large intensities of the noise…

Chaotic Dynamics · Physics 2011-06-08 Peter D. Ditlevsen , Holger Braun

Developmental dynamics of multicellular organism is a process that takes place in a multi-stable system in which each attractor state represents a cell type and attractor transitions correspond to cell differentiation paths. This new…

Molecular Networks · Quantitative Biology 2012-06-12 Joseph Xu Zhou , M. D. S. Aliyu , Erik Aurell , Sui Huang

In this paper the lifetime of quasi-stationary states (QSS) in the $\alpha-$HMF model are investigated at the long range threshold ($\alpha=1$). It is found that QSS exist and have a diverging lifetime $\tau(N)$ with system size which…

Statistical Mechanics · Physics 2012-04-17 Alessio Turchi , Duccio Fanelli , Xavier Leoncini

We study dynamical (quasi)-condensation in the Fermi-Hubbard model starting from a completely uncorrelated initial state of adjacent doubly occupied sites. We show that upon expansion of the system in one dimension, dynamical…

Strongly Correlated Electrons · Physics 2024-02-27 Iva Březinová , Markus Stimpfle , Stefan Donsa , Angel Rubio

Quasistationary states are long-lived nonequilibrium states, observed in some systems with long-range interactions under deterministic Hamiltonian evolution. These intriguing non-Boltzmann states relax to equilibrium over times which…

Statistical Mechanics · Physics 2015-03-17 Shamik Gupta , David Mukamel

We address a simple connection between results of Hamiltonian nonlinear dynamical theory and thermostatistics. Using a properly defined dynamical temperature in low-dimensional symplectic maps, we display and characterize long-standing…

Statistical Mechanics · Physics 2015-06-24 Fulvio Baldovin , Edgardo Brigatti , Constantino Tsallis

Physical systems with many degrees of freedom can often be understood in terms of transitions between a small number of metastable states. For time-homogeneous systems with short-term memory these transitions are fully characterized by a…

Molecular Networks · Quantitative Biology 2015-06-03 Nils B. Becker , Pieter Rein ten Wolde

Quasipatterns have been found in dissipative systems ranging from Faraday waves in vertically vibrated fluid layers to nonlinear optics. We describe the dynamics of octagonal, decagonal and dodecagonal quasipatterns by means of coupled…

Pattern Formation and Solitons · Physics 2009-10-31 Blas Echebarria , Hermann Riecke

Long lived quasi-stationary states (QSSs) are a signature characteristic of long-range interacting systems both in the classical and in the quantum realms. Often, they emerge after a sudden quench of the Hamiltonian internal parameters and…

Quantum Physics · Physics 2021-08-20 Nicolò Defenu

Many natural systems, such as neurons firing in the brain or basketball teams traversing a court, give rise to time series data with complex, nonlinear dynamics. We can gain insight into these systems by decomposing the data into segments…

Motivated by Berg's notion of quasi-disjointness for ergodic systems, we introduce and investigate the concept of quasi-disjointness for minimal systems. Several equivalent characterizations are provided. We prove that quasi-disjointness is…

Dynamical Systems · Mathematics 2026-05-29 Hui Xu , Xiangdong Ye

We present a formalism to describe slowly decaying systems in the context of finite Markov chains obeying detailed balance. We show that phase space can be partitioned into approximately decoupled regions, in which one may introduce…

Statistical Mechanics · Physics 2007-05-23 Hernan Larralde , Francois Leyvraz , David P. Sanders

Chaos in both dissipative systems and conservative systems is investigated on the approach of renormalization group. It is found that the chaos is regarded as the critical phenomenon of equilibrium statistics in phase space. The two…

Chaotic Dynamics · Physics 2026-02-12 Yonghui Xia , Hongtao Feng

The dynamics of a single quantum state embedded in one or several (quasi-)continua is one of the most studied phenomena in quantum mechanics. In this work we investigate its discrete analogue and consider short and long time dynamics based…

Quantum Physics · Physics 2023-06-06 Jan Petter Hansen , Konrad Tywoniuk

Self-sustained dynamical phases of living matter can exhibit remarkable similarities over a wide range of scales, from mesoscopic vortex structures in microbial suspensions and motility assays of biopolymers to turbulent large-scale…

Soft Condensed Matter · Physics 2013-04-29 Jörn Dunkel , Sebastian Heidenreich , Markus Bär , Raymond E. Goldstein

A one-dimensional dynamical system with a marginal quasiperiodic gradient is presented as a mathematical extension of a nonuniform oscillator. The system exhibits a nonchaotic stagnant motion, which is reminiscent of intermittent chaos. In…

Chaotic Dynamics · Physics 2008-08-25 Takahito Mitsui
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