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Self-gravity plays an important role in the evolution of rotationally supported systems such as protoplanetary disks, accretion disks around black holes, or galactic disks, as it can both feed turbulence or lead to gravitational…

Earth and Planetary Astrophysics · Physics 2023-09-28 Oliver Zier , Volker Springel

In this paper, we introduce a new representation for ordered trees, the weight sequence representation. We then use this to construct new representations for both rooted trees and free trees, namely the canonical weight sequence…

Data Structures and Algorithms · Computer Science 2021-02-24 Paul Brown , Trevor Fenner

We introduce FastPM, a highly-scalable approximated particle mesh N-body solver, which implements the particle mesh (PM) scheme enforcing correct linear displacement (1LPT) evolution via modified kick and drift factors. Employing a…

Cosmology and Nongalactic Astrophysics · Physics 2017-09-14 Yu Feng , Man-Yat Chu , Uros Seljak , Patrick McDonald

In the first part of a series of two papers, we present in considerable detail a collision-driven molecular dynamics algorithm for a system of nonspherical particles, within a parallelepiped simulation domain, under both periodic or…

Computational Physics · Physics 2007-05-23 Aleksandar Donev , Salvatore Torquato , Frank H. Stillinger

We introduce Decision Tree Decoders (DTDs), which rely only on the sparsity of the binary check matrix, making them broadly applicable for decoding any quantum low-density parity-check (qLDPC) code and fault-tolerant quantum circuits. DTDs…

Quantum Physics · Physics 2025-02-25 Kai R. Ott , Bence Hetényi , Michael E. Beverland

This work presents an efficient algorithm for generating statistically representative microstructures of particulate composites in periodic representative volume elements. The Swelling and Random Migration (SRM) algorithm combines…

Computational Engineering, Finance, and Science · Computer Science 2026-05-19 Sergejs Tarasovs

Tensor contraction operations in computational chemistry consume significant fractions of computing time on large-scale computing platforms. The widespread use of tensor contractions between large multi-dimensional tensors in describing…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-11 Erdal Mutlu , Ajay Panyala , Nitin Gawande , Abhishek Bagusetty , Jinsung Kim , Karol Kowalski , Nicholas Bauman , Bo Peng , Jiri Brabec , Sriram Krishnamoorthy

The phase transition in the number partitioning problem (NPP), i.e., the transition from a region in the space of control parameters in which almost all instances have many solutions to a region in which almost all instances have no…

Condensed Matter · Physics 2016-08-16 Peter F. Stadler , Wim Hordijk , José F. Fontanari

Tree matching techniques have been investigated in many fields, including web data mining and extraction, as a key component to analyze the content of web documents, existing tree matching approaches, like Tree-Edit Distance (TED) or…

Databases · Computer Science 2024-06-28 Sacha Brisset , Romain Rouvoy , Renaud Pawlak , Lionel Seinturier

We present approximation algorithms for the following NP-hard optimization problems related to bottleneck spanning trees in metric spaces. 1. The disjoint bottleneck spanning tree problem: Given $n$ pairs of points in a metric space, find…

Computational Geometry · Computer Science 2021-11-11 Ahmad Biniaz , Anil Maheshwari , Michiel Smid

Scalable and efficient numerical simulations continue to gain importance, as computation is firmly established as the third pillar of discovery, alongside theory and experiment. Meanwhile, the performance of computing hardware grows through…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-26 Pietro Incardona , Antonio Leo , Yaroslav Zaluzhnyi , Rajesh Ramaswamy , Ivo F. Sbalzarini

Collision detection of a large number N of particles can be challenging. Directly testing N particles for collision among each other leads to N 2 queries. Especially in scenarios, where fast, densely packed particles interact, challenges…

Computational Physics · Physics 2016-08-04 Oliver Jansen , Emmanuel d'Humières , Xavier Ribeyre , Sophie Jequier , Vladimir Tikhonchuk

We consider a variant of treewidth that we call clique-partitioned treewidth in which each bag is partitioned into cliques. This is motivated by the recent development of FPT-algorithms based on similar parameters for various problems. With…

Data Structures and Algorithms · Computer Science 2023-02-20 Thomas Bläsius , Maximilian Katzmann , Marcus Wilhelm

Spanning tree modulus is a generalization of effective resistance that is closely related to graph strength and fractional arboricity. The optimal edge density associated with spanning tree modulus is known to produce two hierarchical…

Combinatorics · Mathematics 2024-07-26 Nathan Albin , Kapila Kottegoda , Pietro Poggi-Corradini

We implement machine learning algorithms to nuclear data. These algorithms are purely data driven and generate models that are capable to capture intricate trends. Gradient boosted trees algorithm is employed to generate a trained model…

Nuclear Theory · Physics 2019-07-24 Nishchal R. Dwivedi

In this paper, we propose the distributed tree kernels (DTK) as a novel method to reduce time and space complexity of tree kernels. Using a linear complexity algorithm to compute vectors for trees, we embed feature spaces of tree fragments…

Machine Learning · Computer Science 2012-06-22 Fabio Massimo Zanzotto , Lorenzo Dell'Arciprete

The Partitioning Min-Max Weighted Matching (PMMWM) problem is an NP-hard problem that combines the problem of partitioning a group of vertices of a bipartite graph into disjoint subsets with limited size and the classical Min-Max Weighted…

Data Structures and Algorithms · Computer Science 2022-01-26 Yuxuan Wang , Jinyao Xie , Jiongzhi Zheng , Kun He

Particle probability hypothesis density filtering has become a promising means for multi-target tracking due to its capability of handling an unknown and time-varying number of targets in non-linear non-Gaussian system. However, its…

Computation · Statistics 2015-03-13 Wang Junjie , Zhao Lingling , Su Xiaohong , Ma Peijun

Computing dynamical distributions in quantum many-body systems represents one of the paradigmatic open problems in theoretical condensed matter physics. Despite the existence of different techniques both in real-time and frequency space,…

Disordered Systems and Neural Networks · Physics 2021-08-04 Rouven Koch , Jose L. Lado

In transmission networks, power flows and network topology are deeply intertwined due to power flow physics. Recent literature shows that a specific more hierarchical network structure can effectively inhibit the propagation of line…

Optimization and Control · Mathematics 2025-02-06 Leon Lan , Alessandro Zocca