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The time sequences of the molecular dynamics simulation for the folding process of a protein is analyzed with the inherent structure landscape which focuses on configurational dynamics of the system. Time dependent energy and entropy for…

Statistical Mechanics · Physics 2013-02-13 Naoko Nakagawa

Thermal energy agitates all matter and its competition with ordering tendencies is one of the most fundamental organizing principles in the physical world. Thus, it is natural to enquire if an effective temperature could result when…

Statistical Mechanics · Physics 2018-09-10 Ming Han , Jing Yan , Steve Granick , Erik Luijten

A theoretical model of the transition radiation (TR) emission of an N electron bunch must comply with the covariance and the temporal-causality principles. A charge-density-like covariance must indeed imprint the formal expression of the TR…

Accelerator Physics · Physics 2013-06-05 Gian Luca Orlandi

The observations combined with theory of neutron star (NS) cooling play a crucial role in achieving the intriguing information of the stellar interior, such as the equation of state (EOS), composition and superfluidity of dense matter. The…

Nuclear Theory · Physics 2018-09-12 J. M. Dong , L. J. Wang , W. Zuo

We address the issue of the quantum-classical correspondence in chaotic systems using, as recently done by Zurek [e-print quant-ph/9802054], the solar system as a whole as a case study: this author shows that the classicality of the…

Quantum Physics · Physics 2011-08-04 David Vitali , Paolo Grigolini

Winds from massive stars have velocities of 1000 km/s or more, and produce hot, high pressure gas when they shock. We develop a theory for the evolution of bubbles driven by the collective winds from star clusters early in their lifetimes,…

Astrophysics of Galaxies · Physics 2021-06-30 Lachlan Lancaster , Eve C. Ostriker , Jeong-Gyu Kim , Chang-Goo Kim

A thermodynamical description for the quasi-static collapse of radiating, self-gravitating spherical shells of matter in anti-de Sitter space-time is obtained. It is shown that the specific heat at constant area and other thermodynamical…

General Relativity and Quantum Cosmology · Physics 2008-11-26 G. L. Alberghi , R. Casadio , G. Venturi

We present some analytical solutions to the Einstein equations, describing radiating collapsing spheres in the diffusion approximation. Solutions allow for modeling physical reasonable situations. The temperature is calculated for each…

General Relativity and Quantum Cosmology · Physics 2008-11-26 L. Herrera , A. Di Prisco , J. Ospino

Stars form by the gravitational collapse of interstellar gas. The thermodynamic response of the gas can be characterized by an effective equation of state. It determines how gas heats up or cools as it gets compressed, and hence plays a key…

We describe an algebraic way to code the causal information of a discrete spacetime. The causal set C is transformed to a description in terms of the causal pasts of the events in C. This is done by an evolving set, a functor which to each…

General Relativity and Quantum Cosmology · Physics 2014-11-17 Fotini Markopoulou

Stips, Macias, Coughlan, Garcia-Gorriz, and Liang (2016, Nature Scientific Reports) use information flows (Liang, 2008, 2014) to establish causality from various forcings to global temperature. We show that the formulas being used hinges on…

Applications · Statistics 2021-03-22 Philippe Goulet Coulombe , Maximilian Göbel

This paper analyzes a simplified model of viral infection and evolution using the 'grand canonical ensemble' and formalisms from statistical mechanics and thermodynamics to enumerate all possible viruses and to derive thermodynamic…

Populations and Evolution · Quantitative Biology 2016-01-08 Barbara A. Jones , Justin Lessler , Simone Bianco , James H. Kaufman

Galactic archaeology--the study of stellar migration histories--provides insights into galaxy formation and evolution. However, establishing causal relationships between observable stellar properties and their birth conditions remains…

Astrophysics of Galaxies · Physics 2025-07-02 Zehao Jin , Yuxi Lu , Yuan-Sen Ting , Yujia Zheng , Tobias Buck

What is the difference of a prediction that is made with a causal model and a non-causal model? Suppose we intervene on the predictor variables or change the whole environment. The predictions from a causal model will in general work as…

Methodology · Statistics 2024-04-27 Jonas Peters , Peter Bühlmann , Nicolai Meinshausen

(abridged) The calculation of the thermal stratification in the superadiabatic layers of stellar models with convective envelopes is a long standing problem of stellar astrophysics, and has a major impact on predicted observational…

Solar and Stellar Astrophysics · Physics 2015-05-06 Maurizio Salaris , Santi Cassisi

The theory of causal fermion systems is a new physical theory which aims to describe a fundamental level of physical reality. Its mathematical core is the causal action principle. In this thesis, we develop a formalism which connects the…

Mathematical Physics · Physics 2020-06-26 Johannes Kleiner

Theoretical studies of the physical processes guiding the formation and evolution of galaxies and galaxy clusters in the X-ray are mainly based on the results of numerical hydrodynamical N-body simulations, which in turn are often directly…

Astrophysics · Physics 2015-06-24 P. Mazzotta , E. Rasia , L. Moscardini , G. Tormen

Observations strongly suggest that filaments in galactic molecular clouds are in a non-thermal state. As a simple model of a filament we study a two-dimensional system of self-gravitating point particles by means of numerical simulations of…

Astrophysics of Galaxies · Physics 2018-01-25 Pierfrancesco Di Cintio , Shamik Gupta , Lapo Casetti

These days, as high energy particle colliders become unavailable for testing speculative theoretical ideas, physicists are looking to other environments that may provide extreme conditions where theory confronts physical reality. One such…

High Energy Physics - Theory · Physics 2016-09-06 R. Jackiw

There is a long-standing question as to whether and to what extent it is possible to describe nonequilibrium systems in stationary states in terms of global thermodynamic functions. The positive answers have been obtained only for…

Statistical Mechanics · Physics 2022-11-30 Robert Hołyst , Karol Makuch , Anna Maciołek , Paweł J. Żuk