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In the realm of medical 3D data, such as CT and MRI images, prevalent anisotropic resolution is characterized by high intra-slice but diminished inter-slice resolution. The lowered resolution between adjacent slices poses challenges,…

Image and Video Processing · Electrical Eng. & Systems 2024-04-09 Wei Fang , Yuxing Tang , Heng Guo , Mingze Yuan , Tony C. W. Mok , Ke Yan , Jiawen Yao , Xin Chen , Zaiyi Liu , Le Lu , Ling Zhang , Minfeng Xu

The Segment Anything Model (SAM) has achieved a notable success in two-dimensional image segmentation in natural images. However, the substantial gap between medical and natural images hinders its direct application to medical image…

Computer Vision and Pattern Recognition · Computer Science 2024-04-17 Quan Quan , Fenghe Tang , Zikang Xu , Heqin Zhu , S. Kevin Zhou

The visualization of volumetric medical data is crucial for enhancing diagnostic accuracy and improving surgical planning and education. Cinematic rendering techniques significantly enrich this process by providing high-quality…

Computer Vision and Pattern Recognition · Computer Science 2025-07-10 Chengkun Li , Yuqi Tong , Kai Chen , Zhenya Yang , Ruiyang Li , Shi Qiu , Jason Ying-Kuen Chan , Pheng-Ann Heng , Qi Dou

Volumetric change in glioblastoma multiforme (GBM) over time is a critical factor in treatment decisions. Typically, the tumor volume is computed on a slice-by-slice basis using MRI scans obtained at regular intervals. (3D)Slicer - a free…

Computer Vision and Pattern Recognition · Computer Science 2013-03-06 Jan Egger , Tina Kapur , Andriy Fedorov , Steve Pieper , James V. Miller , Harini Veeraraghavan , Bernd Freisleben , Alexandra Golby , Christopher Nimsky , Ron Kikinis

The rapid development in information technology has immensely contributed to the use of modern approaches for visualizing volumetric data. Consequently, medical volume visualization is increasingly attracting attention towards achieving an…

Computational Geometry · Computer Science 2012-11-27 A. M. Adeshina , R. Hashim , N. E. A. Khalid , Siti Z. Z. Abidin

During the last decades, anatomy has become an interesting topic in education---even for laymen or schoolchildren. As medical imaging techniques become increasingly sophisticated, virtual anatomical education applications have emerged.…

Graphics · Computer Science 2020-11-23 Renata G. Raidou , M. Eduard Gröller , Hsiang-Yun Wu

In this work, we extend the SEEDS superpixel algorithm from 2D images to 3D volumes, resulting in 3D SEEDS, a faster, better, and open-source supervoxel algorithm for medical image analysis. We compare 3D SEEDS with the widely used…

Computer Vision and Pattern Recognition · Computer Science 2025-02-05 Chenhui Zhao , Yan Jiang , Todd C. Hollon

Volume visualization is a method that displays three-dimensional (3D) data in two-dimensional (2D) space. Using 3D datasets instead of 2D traditional images improves the visualization of anatomical structures, and volume visualization helps…

Three-dimensional medical image segmentation is a fundamental yet computationally demanding task due to the cubic growth of voxel processing and the redundant computation on homogeneous regions. To address these limitations, we propose…

Computer Vision and Pattern Recognition · Computer Science 2026-01-09 Sen Zeng , Hong Zhou , Zheng Zhu , Yang Liu

Volumetric biomedical microscopy has the potential to increase the diagnostic information extracted from clinical tissue specimens and improve the diagnostic accuracy of both human pathologists and computational pathology models.…

Image and Video Processing · Electrical Eng. & Systems 2024-04-16 Cheng Jiang , Alexander Gedeon , Yiwei Lyu , Eric Landgraf , Yufeng Zhang , Xinhai Hou , Akhil Kondepudi , Asadur Chowdury , Honglak Lee , Todd Hollon

Astronomy is entering a new era of discovery, coincident with the establishment of new facilities for observation and simulation that will routinely generate petabytes of data. While an increasing reliance on automated data analysis is…

Instrumentation and Methods for Astrophysics · Physics 2015-05-27 Amr Hassan , Christopher J. Fluke

Laser scanning microscopy enables the acquisition of 3D data in biomedical research. A fundamental challenge in visualizing 3D data is that common flat-panel displays, being 2D in nature, cannot faithfully reproduce light fields. Recent…

Graphics · Computer Science 2025-05-26 Yong Wan , Holly A. Holman , Charles Hansen

We introduce OCULAR, an innovative hardware and software solution for three-dimensional dynamic image analysis of fine particles. Current state-of-the art instruments for dynamic image analysis are largely limited to two-dimensional…

Computer Vision and Pattern Recognition · Computer Science 2024-12-10 Sadegh Nadimi , Vasileios Angelidakis , Sadaf Maramizonouz , Chao Zhang

Whether aimed for the study of the planetary systems, the distribution of the stars in the galaxies or the formation of the large-scale structures in the Universe, the sizes of numerical simulations are becoming increasingly important in…

Instrumentation and Methods for Astrophysics · Physics 2018-08-17 F. Marin , J. Desroziers , A. Schaaff

The Astronomy & Cosmology (A&C) community is presently witnessing an unprecedented growth in the quality and quantity of data coming from simulations and observations. Writing results of numerical simulations to disk files has long been a…

Instrumentation and Methods for Astrophysics · Physics 2025-10-29 Nicola Tuccari , Eva Sciacca , Yolanda Becerra , Enric Sosa Cintero , Robert Wissing , Sijing Shen , Emiliano Tramontana

Medical imaging is limited by acquisition time and scanning equipment. CT and MR volumes, reconstructed with thicker slices, are anisotropic with high in-plane resolution and low through-plane resolution. We reveal an intriguing phenomenon…

Image and Video Processing · Electrical Eng. & Systems 2024-05-07 Haofei Song , Xintian Mao , Jing Yu , Qingli Li , Yan Wang

Three-dimensional (3D) ultrasound imaging can overcome the limitations of conventional two dimensional (2D) ultrasound imaging in structural observation and measurement. However, conducting volumetric ultrasound imaging for large-sized…

Image and Video Processing · Electrical Eng. & Systems 2024-12-03 Caozhe Li , Enxiang Shen , Haoyang Wang , Yuxin Wang , Jie Yuan , Li Gong , Di Zhao , Weijing Zhang , Zhibin Jin

A next-generation instrument named, Slicer Combined with Array of Lenslets for Exoplanet Spectroscopy (SCALES), is being planned for the W. M. Keck Observatory. SCALES will have an integral field spectrograph (IFS) and a diffraction-limited…

The IDIA Visualisation Laboratory based at the University of Cape Town is exploring the use of virtual reality technology to visualise and analyse astronomical data. The iDaVIE software suite currently under development reads from both…

Instrumentation and Methods for Astrophysics · Physics 2021-03-29 Alexander K. Sivitilli , Angus Comrie , Lucia Marchetti , Thomas H. Jarrett

As modern astronomy confronts unprecedented data volumes, automated pipelines and machine-learning techniques have become essential for processing and analysis. As these workflows grow more complex, astronomers also require input and…