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Two ocean models are considered for geophysical flow simulations: the multi-layer shallow water equations and the multi-layer primitive equations. For the former, we investigate the parallel performance of exponential time differencing…

Atmospheric and Oceanic Physics · Physics 2021-10-04 Rihui Lan , Wei Leng , Zhu Wang , Lili Ju , Max Gunzburger

Disordered molecular systems such as amorphous catalysts, organic thin films, electrolyte solutions, and water are at the cutting edge of computational exploration today. Traditional simulations of such systems at length-scales relevant to…

Mesoscale and Nanoscale Physics · Physics 2023-09-06 Ata Madanchi , Michael Kilgour , Frederik Zysk , Thomas D. Kühne , Lena Simine

We present a new 1-D multi-physics simulation code with use cases intended for, but not limited to, hydrodynamic escapeproblems of planetary atmospheres and planetary accretion models. Our formulation treats an arbitrary number of species…

Earth and Planetary Astrophysics · Physics 2023-05-10 Matthäus Schulik , Richard Booth

The numerical simulation of fluid flow through a complex geometry with heat transfer is of strong interest for many applications, such as oil-filled power transformers. A fundamental challenge here is that high resolution is necessary to…

Computational Physics · Physics 2020-10-19 Ole H. H. Meyer , Karl Yngve Lervåg , Åsmund Ervik

We introduce a modified and simplified version of the pre-existing fully parallelized three-dimensional Navier--Stokes flow solver known as TPLS. We demonstrate how the simplified version can be used as a pedagogical tool for the study of…

Physics Education · Physics 2015-11-25 James Fannon , Jean-Christophe Loiseau , Prashant Valluri , Iain Bethune , Lennon O'Naraigh

The coarse-grained molecular dynamics (MD) or Brownian dynamics (BD) simulation is a particle-based approach that has been applied to a wide range of biological problems that involve interactions with surrounding fluid molecules or the…

Soft Condensed Matter · Physics 2014-11-20 Szu-Pei Fu , Yuan-Nan Young , Shidong Jiang

Simulating liquid water to an accuracy that matches its wealth of available experimental data requires both precise electronic structure methods and reliable sampling of nuclear (quantum) motion. This is challenging because applying the…

We describe a new hybrid N-body/hydrodynamical code based on the particle-mesh (PM) method and the piecewise-parabolic method (PPM) for use in solving problems related to the evolution of large-scale structure, galaxy clusters, and…

Astrophysics · Physics 2009-10-31 P. M. Ricker , S. Dodelson , D. Q. Lamb

In many applications free surface flow through rigid porous media has to be modeled. Examples refer to coastal engineering applications as well as geotechnical or biomedical applications. Albeit the frequent applications, slight…

Fluid Dynamics · Physics 2021-06-28 Wibke Düsterhöft-Wriggers , Antonia Larese , Thomas Rung , Eugenio Oñate

We live in an age in which high-performance computing is transforming the way we do science. Previously intractable problems are now becoming accessible by means of increasingly realistic numerical simulations. One of the most enduring and…

We developed a portable code for dissipative particle dynamics (DPD) simulations. This Fortran program named CAMUS has a couple of notable features. One is the omission of constructing the so-called neighboring particles list, providing a…

Chemical Physics · Physics 2018-07-03 Hideo Doi , Koji Okuwaki , Takamitsu Naito , Sona Saitou , Yuji Mochizuki

This paper introduces a new discrete fracture model accounting for non-isothermal compositional multiphase Darcy flows and complex networks of fractures with intersecting, immersed and non immersed fractures. The so called…

Numerical Analysis · Mathematics 2017-07-13 Feng Xing , Roland Masson , Simon Lopez

This report discusses the implementation of two parallel algorithms on a distributed memory system for studying vortex dynamics in type-II superconductors. These algorithms are the same as that implemented for classical molecular dynamics…

Superconductivity · Physics 2007-05-23 Mahesh Chandran

We provide a mathematically proven parallelization scheme for particle methods on distributed-memory computer systems. Particle methods are a versatile and widely used class of algorithms for computer simulations and numerical predictions…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-05 Johannes Pahlke , Ivo F. Sbalzarini

We show that efficient simulations of the Kardar-Parisi-Zhang interface growth in 2 + 1 dimensions and of the 3-dimensional Kinetic Monte Carlo of thermally activated diffusion can be realized both on GPUs and modern CPUs. In this article…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-01-21 Jeffrey Kelling , Géza Ódor , Máté Ferenc Nagy , Henrik Schulz , Karl-Heinz Heinig

In order to enhance safety, nuclear reactors in the design phase consider natural circulation as a mean to remove residual power. The simulation of this passive mechanism must be qualified between the validation range and the scope of…

Classical Physics · Physics 2024-05-29 Haifu Huang , Jorge Perez , Nicolas Alpy , Marc Medale

A parallel dispersive finite-difference time-domain (FDTD) method for the modeling of three-dimensional (3-D) electromagnetic cloaking structures is presented in this paper. The permittivity and permeability of the cloak are mapped to the…

Computational Physics · Physics 2015-05-13 Yan Zhao , Yang Hao

A numerical model and parallel software for 3D simulations of granular flows have been developed based on the Lagrangian particle (LP) method [R.Samulyak, X. Wang, H.-C. Chen, Lagrangian particle method for compressible fluid dynamics, J.…

Computational Physics · Physics 2022-06-29 Mario Zepeda , Roman Samulyak

Our understanding of magnetic reconnection (MR) under chromospheric conditions remains limited. Recent observations have demonstrated the important role of ion-neutral interactions in the dynamics of the chromosphere. Furthermore, the…

Solar and Stellar Astrophysics · Physics 2023-04-19 Q. M. Wargnier , J. Martinez-Sykora , V. H. Hansteen , B. De Pontieu

w-Projection is a wide-field imaging technique that is widely used in radio synthesis arrays. Processing the wide-field big data generated by the future Square Kilometre Array (SKA) will require significant updates to current methods to…

Instrumentation and Methods for Astrophysics · Physics 2019-11-11 Baoqiang Lao , Tao An , Ang Yu , Wenhui Zhang , Junyi Wang , Quan Guo , Shaoguang Guo , Xiaocong Wu