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We present an efficient open-source implementation of the multiparticle collision dynamics (MPCD) algorithm that scales to run on hundreds of graphics processing units (GPUs). We especially focus on optimizations for modern GPU…

Soft Condensed Matter · Physics 2018-08-01 Michael P. Howard , Athanassios Z. Panagiotopoulos , Arash Nikoubashman

A hybrid-parallel direct-numerical-simulation method with application to turbulent Taylor-Couette flow is presented. The Navier-Stokes equations are discretized in cylindrical coordinates with the spectral Fourier-Galerkin method in the…

Computational Physics · Physics 2014-10-21 Liang Shi , Markus Rampp , Bjoern Hof , Marc Avila

Simulating large-scale microswimmer dynamics in viscous fluid poses significant challenges due to the coupled high spatial and temporal complexity. Conventional high-performance computing (HPC) methods often address these two dimensions in…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-15 Ruixiang Huang , Weifan Liu

This paper introduces the Sheffield Magnetohydrodynamics Algorithm Using GPUs (SMAUG+), an advanced numerical code for solving magnetohydrodynamic (MHD) problems, using multi-GPU systems. Multi-GPU systems facilitate the development of…

Computational Physics · Physics 2017-12-01 N. Gyenge , M. K. Griffiths , R. Erdélyi

The molecular dynamics simulation code ls1 mardyn is presented. It is a highly scalable code, optimized for massively parallel execution on supercomputing architectures, and currently holds the world record for the largest molecular…

A second-order accurate divergence-conserving hybrid particle-in-cell code Maximus has been developed for microscopic modeling of collisionless plasmas. The main specifics of the code include a constrained transport algorithm for exact…

Computational Physics · Physics 2019-03-11 J. A. Kropotina , A. M. Bykov , A. M. Krassilchtchikov , K. P. Levenfish

Immersed boundary-lattice Boltzmann method (IB-LBM) has been widely used for simulation of particle-laden flows recently. However, it was limited to small-scale simulations with no more than O(103) particles. Here, we expand IB-LBM for…

Computational Physics · Physics 2020-02-21 Maoqiang Jiang , Jing Li , Zhaohui Liu

Computer simulation is an important tool for scientific progress, especially when lab experiments are either extremely costly and difficult or lack the required resolution. However, all of the simulation methods come with limitations. In…

Fluid Dynamics · Physics 2023-08-04 Edward R. Smith , Panagiotis E. Theodorakis

We develop an efficient parallel multiscale method that bridges the atomistic and mesoscale regimes, from nanometer to micron and beyond, via concurrent coupling of atomistic simulation and mesoscopic dynamics. In particular, we combine an…

Computational Physics · Physics 2020-12-23 Yuying Wang , Zhen Li , Junbo Xu , Chao Yang , George Em Karniadakis

The emergence of three-dimensional magneto-hydrodynamic (MHD) simulations of stellar atmospheres has sparked a need for efficient radiative transfer codes to calculate detailed synthetic spectra. We present RH 1.5D, a massively parallel…

Solar and Stellar Astrophysics · Physics 2015-01-21 Tiago M. D. Pereira , Han Uitenbroek

In order to run Computational Fluid Dynamics (CFD) codes on large scale infrastructures, parallel computing has to be used because of the computational intensive nature of the problems. In this paper we investigate the ADAPT platform where…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-05-25 Imad Kissami , Christophe Cerin , Fayssal Benkhaldoun , Gilles Scarella

A new three-dimensional, non-linear Magnetohydrodynamics (MHD) model has been extended in MIPS code, incorporating parallel heat diffusivity. The model has been benchmarked against the former MHD model used in MIPS code. A preliminary study…

Plasma Physics · Physics 2025-08-26 A. Civit-Bertran , S. Futatani , Y. Suzuki , J. Dominguez-Palacios

We describe a new, faster implicit algorithm for solving the radiation hydrodynamics equations in the flux-limited diffusion approximation for smoothed particle hydrodynamics. This improves on the method elucidated in Whitehouse & Bate by…

Astrophysics · Physics 2009-11-13 Stuart C. Whitehouse , Matthew R. Bate , Joe J. Monaghan

We develop an algorithm suitable for parallel molecular dynamics simulations in $d$ spatial dimensions and describe its implementation in C++. All routines work in arbitrary $d$; the maximum simulated $d$ is limited only by available…

Soft Condensed Matter · Physics 2022-05-18 Robert S. Hoy , Kevin A. Interiano-Alberto

Large scale simulations of complex systems ranging from climate and astrophysics to crowd dynamics, produce routinely petabytes of data and are projected to reach the zettabytes level in the coming decade. These simulations enable…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-20 Panagiotis Hadjidoukas , Fabian Wermelinger

This article describes algorithms for the hybrid parallelization and SIMD vectorization of molecular dynamics simulations with short-range forces. The parallelization method combines domain decomposition with a thread-based parallelization…

Materials Science · Physics 2017-09-13 Chris M. Mangiardi , Ralf Meyer

A computational fluid dynamics (CFD) simulation framework for fluid-flow prediction is developed on the Tensor Processing Unit (TPU) platform. The TPU architecture is featured with accelerated dense matrix multiplication, large high…

Computational Physics · Physics 2022-03-02 Qing Wang , Matthias Ihme , Yi-Fan Chen , John Anderson

We describe a new numerical scheme for MHD which combines a higher order Godunov method (PPM) with Constrained Transport. The results from a selection of multidimensional test problems are presented. The complete test suite used to validate…

Astrophysics · Physics 2009-11-10 James M. Stone , Thomas A. Gardiner

In this paper we describe a numerical method designed for modelling different kinds of astrophysical flows in three dimensions. Our method is a standard explicit finite difference method employing the local shearing-box technique. To model…

Astrophysics · Physics 2009-11-06 S. E. Caunt , M. J. Korpi

Quantum computational fluid dynamics (QCFD) offers a promising alternative to classical computational fluid dynamics (CFD) by leveraging quantum algorithms for higher efficiency. This paper introduces a comprehensive QCFD method, including…