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Spatial reaction-diffusion models have been employed to describe many emergent phenomena in biological systems. The modelling technique most commonly adopted in the literature implements systems of partial differential equations (PDEs),…

Quantitative Methods · Quantitative Biology 2015-10-05 Christian A. Yates , Mark B. Flegg

We develop a new numerical scheme for solving the radiative transfer equation in a spherically symmetric system. This scheme does not rely on any kind of diffusion approximation and it is accurate for optically thin, thick, and intermediate…

Instrumentation and Methods for Astrophysics · Physics 2018-05-31 Torsten Stamer , Shu-ichiro Inutsuka

We present capacity results of the binary-symmetric parallel-relay network, where there is one source, one destination, and K relays in parallel. We show that forwarding relays, where the relays merely transmit their received signals,…

Information Theory · Computer Science 2015-03-14 Lawrence Ong , Sarah J. Johnson , Christopher M. Kellett

The distribution of entanglement in quantum networks is typically approached under idealized assumptions such as perfect synchronization and centralized control, while classical communication is often neglected. However, these assumptions…

Quantum Physics · Physics 2024-06-04 Shahrooz Pouryousef , Hassan Shapourian , Don Towsley

This paper studies parallelization schemes for stochastic Vector Quantization algorithms in order to obtain time speed-ups using distributed resources. We show that the most intuitive parallelization scheme does not lead to better…

Machine Learning · Statistics 2012-05-14 Matthieu Durut , Benoît Patra , Fabrice Rossi

In this paper, we developed a new parametrization method to calculate the localization length in one-dimensional Anderson model with diagonal disorder. This method can avoid the divergence difficulty encountered in the conventional methods,…

Disordered Systems and Neural Networks · Physics 2010-08-10 Kai Kang , Shaojing Qin , Chuilin Wang

This paper presents novel approaches to parallelizing particle interactions on a GPU when there are few particles per cell and the interactions are limited by a cutoff distance. The paper surveys classical algorithms and then introduces two…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-25 David Algis , Berenger Bramas , Emmanuelle Darles , Lilian Aveneau

An indirect, hybrid Monte Carlo discretization of general relativistic kinetic theory suitable for the development of numerical schemes for radiation transport is presented. The discretization is based on surface flux estimators obtained…

Astrophysics · Physics 2012-12-12 Burkhard Zink

Projecting a vector onto a simplex is a well-studied problem that arises in a wide range of optimization problems. Numerous algorithms have been proposed for determining the projection; however, the primary focus of the literature has been…

Optimization and Control · Mathematics 2023-10-11 Yongzheng Dai , Chen Chen

We describe a code designed for hot media {(T $\ge$} a few 10$^4$ K), optically thick to Compton scattering. It computes the structure of a plane-parallel slab of gas in thermal and ionization equilibrium, illuminated on one side or on both…

Astrophysics · Physics 2009-09-25 Anne-Marie Dumont , Suzy Collin

We consider the radiation transfer problem in the discrete-ordinate, plane-parallel approach. We introduce two benchmark problems with exact known solutions and show that for strongly non-homogeneous media the homogeneous layers…

Computational Physics · Physics 2007-05-23 M. -P. Zorzano , A. M. Mancho , L. Vazquez

We introduce a refinement of the standard continuous variable teleportation measurement and displacement strategies. This refinement makes use of prior knowledge about the target state and the partial information carried by the classical…

Quantum Physics · Physics 2009-11-07 P. T. Cochrane , T. C. Ralph

Accreting supermassive black holes are sources of polarized radiation that propagates through highly curved spacetime before reaching the observer. In order to help interpret observations of such polarized emission, accurate and efficient…

High Energy Astrophysical Phenomena · Physics 2020-10-20 Thomas Bronzwaer , Ziri Younsi , Jordy Davelaar , Heino Falcke

Recent advances in the technology of transmission electron microscopy have allowed for a more precise visualization of materials and physical processes, such as metal oxidation. Nevertheless, the quality of information is limited by the…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-12-08 Marcin Copik

In this paper, we propose a domain decomposition dynamical low-rank method to solve high-dimensional radiative transfer problems and similar kinetic equations. The algorithm uses a separate low-rank approximation on each spatial subdomain,…

Numerical Analysis · Mathematics 2026-02-17 Stefan Brunner , Lukas Einkemmer , Terry Haut

Agent-based modelling constitutes a versatile approach to representing and simulating complex systems. Studying large-scale systems is challenging because of the computational time required for the simulation runs: scaling is at least…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-05 Alexandru-Ionuţ Băbeanu , Tatiana Filatova , Jan H. Kwakkel , Neil Yorke-Smith

We present the theoretical framework and numerical methods we have implemented to solve the problem of the generation and transfer of polarized radiation in spectral lines out of local thermodynamical equilibrium, while accounting for…

Solar and Stellar Astrophysics · Physics 2022-09-01 Ernest Alsina Ballester , Luca Belluzzi , Javier Trujillo Bueno

A parallel 2D+1 split-step Fourier method with Crank-Nicholson scheme running on multi-core shared memory architectures is developed to study the propagation of ultra-short high-intensity laser pulses in air. The parallel method achieves a…

Optics · Physics 2015-07-23 Cunliang Ma , Wenbin Lin

This paper presents implementation details and empirical results for a hybrid message passing and shared memory paralleliziation of the adaptive integral method (AIM). AIM is implemented on a (near) petaflop supercomputing cluster of…

Computational Engineering, Finance, and Science · Computer Science 2010-10-08 Fangzhou Wei , Ali E. Yılmaz

Min et al. (2009) presented two complementary techniques that use the diffusion approximation to allow efficient Monte-Carlo radiation transfer in very optically thick regions: a modified random walk and a partial diffusion approximation.…

Instrumentation and Methods for Astrophysics · Physics 2015-05-20 Thomas P. Robitaille