Related papers: Quasar Str\"omgren Spheres Before Cosmological Rei…
Signs of damping wing absorption attenuating the Lyman-$\alpha$ emission line of the first known $z \sim 7$ quasar, ULAS J1120+0641, recently provided exciting evidence of a significantly neutral IGM. This long-awaited signature of…
Detections and non-detections of Lyman alpha (Ly$\alpha$) emission from $z>6$ galaxies ($<1$ Gyr after the Big Bang) can be used to measure the timeline of cosmic reionization. Of key interest to measuring reionization's mid-stages, but…
Thus far, Lyman-$\alpha$ damping wings towards quasars have been used to probe the \textit{global} ionization state of the foreground intergalactic medium (IGM). A new parameterization has demonstrated that the damping wing signature also…
The matter density field at $z\sim 6$ is very challenging to probe. One of the traditional probes of the low density IGM that works successfully at lower redshifts is the Lyman-alpha forest in quasar spectra. However, at the end of…
Ultra-violet (UV) radiation from accreting black holes ionizes the intergalactic gas around early quasars, carving out highly ionized bubbles in their surroundings. Any changes in a quasar's luminosity are therefore predicted to produce…
We present a new method to directly measure the opacity from HI Lyman limit (LL) absorption k_LL along quasar sightlines by the intergalactic medium (IGM). The approach analyzes the average (``stacked'') spectrum of an ensemble of quasars…
The temperature of the diffuse, photo-heated intergalactic medium (IGM) depends on its reionization history because the thermal time scales are long. The widths of the hydrogen Lyman-alpha absorption lines seen in the spectra of distant…
The epoch of reionization (6 < z < 10) marks the period in our universe when the first large galaxies grew to fruition, and began to affect the universe around them. Massive stars, and potentially accreting supermassive black holes, filled…
The importance of HST for the study of quasar absorption lines and of the nature of the intergalactic medium is illustrated by reviewing selected results from past HST observations. Topics reviewed include the study of Ly-alpha absorbers at…
We study the process of cosmic reionization and estimate the ionizing background in the IGM using the Lyman series absorption in the spectra of the four quasars at 5.7<z<6.3 discovered by the SDSS. We derive the evolution of the ionizing…
Observationally mapping the relation between galaxies and the intergalactic medium (IGM) is of key interest for studies of cosmic reionization. Diffuse hydrogen gas has typically been observed in HI Lyman-$\alpha$ (Ly$\alpha$) absorption in…
The sky-averaged (global) 21-cm signal is a powerful probe of the intergalactic medium (IGM) prior to the completion of reionization. However, it has so far been unclear that even in the best case scenario, in which the signal is accurately…
We quantify the presence of Ly\alpha\ damping wing absorption from a partially-neutral intergalactic medium (IGM) in the spectrum of the $z=7.08$ QSO, ULASJ1120+0641. Using a Bayesian framework, we simultaneously account for uncertainties…
We propose to infer ionising continuum leaking properties of galaxies by looking at their Lyman-alpha line profiles. We carry out Lyman-alpha radiation transfer calculations in two models of HII regions which are porous to ionising…
Determining when and how the first galaxies reionized the intergalactic medium (IGM) promises to shed light on both the nature of the first objects and the cosmic history of baryons. Towards this goal, quasar absorption lines play a unique…
One well-known way to constrain the hydrogen neutral fraction, x_H, of the high-redshift intergalactic medium (IGM) is through the shape of the red damping wing of the Lya absorption line. We examine this method's effectiveness in light of…
We propose use of the thickness of the ionisation front as a discriminant between alternative modes of reionisation in the early universe, by stars or by miniquasars. Assuming a photoionisation-recombination balance, we find that for…
Quasar proximity zones at $z>5.5$ correspond to over-dense and over-ionized environments. Galaxies found inside proximity zones can therefore display features which would otherwise be masked by absorption in the IGM. We demonstrate the…
Spectra of high redshift QSOs show deep Gunn-Peterson absorptions on the blue sides of the \Lya emissions lines. They can be decomposed into components called \Lya leaks, defined to be emissive regions in complementary to otherwise…
We present predictions for the fluorescent Lyman-alpha emission signature arising from photoionized, optically thick structures in Smoothed Particle Hydrodynamic (SPH) cosmological simulations of a Lambda-CDM universe using a Monte Carlo…