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Random matrix theory successfully connects the structure of interactions of large ecological communities to their ability to respond to perturbations. One of the most debated aspects of this approach is the missing role of population…

Populations and Evolution · Quantitative Biology 2018-09-12 Theo Gibbs , Jacopo Grilli , Tim Rogers , Stefano Allesina

Ecological networks allow us to study the structure and function of ecosystems and gain insights on species resilience/stability. The study of this ecological networks is usually a snapshop focused in a limited specific range of space and…

Populations and Evolution · Quantitative Biology 2014-07-17 Andrzej Jarynowski , Fco. Alejandro Lopez-Nunez , Han Fan

Most complex networks serve as conduits for various dynamical processes, ranging from mass transfer by chemical reactions in the cell to packet transfer on the Internet. We collected data on the time dependent activity of five natural and…

Disordered Systems and Neural Networks · Physics 2009-11-10 M. Argollo de Menezes , A-L. Barabasi

Several networks occurring in real life have modular structures that are arranged in an hierarchical fashion. In this paper, we have proposed a model for such networks, using a stochastic generation method. Using this model we show that,…

Physics and Society · Physics 2009-03-12 Raj Kumar Pan , Sitabhra Sinha

A striking feature of the marine ecosystem is the regularity in its size spectrum: the abundance of organisms as a function of their weight approximately follows a power law over almost ten orders of magnitude. We interpret this as evidence…

Populations and Evolution · Quantitative Biology 2010-09-17 Jose A. Capitan , Gustav W. Delius

In a complex system, the individual components are neither so tightly coupled or correlated that they can all be treated as a single unit, nor so uncorrelated that they can be approximated as independent entities. Instead, patterns of…

Populations and Evolution · Quantitative Biology 2015-09-15 Blake C. Stacey

We propose a model for co-evolving ecosystems that takes into account two levels of description of an organism, for instance genotype and phenotype. Performance at the macroscopic level forces mutations at the microscopic level. These, in…

adap-org · Physics 2007-05-23 Guillermo Abramson , Jose Luis Vega

The spatial scale of population synchrony gives the characteristic distance at which the population fluctuations are correlated. Therefore, it gives also the characteristic size of the regions of simultaneous population depletion, or even…

Populations and Evolution · Quantitative Biology 2020-12-22 Miguel Ángel Fernández-Grande , Francisco Javier Cao-Garcia

Real-world growth processes and scalings have been broadly categorized into three growth regimes with distinctly different properties and driving forces. The first two are characterized by a positive and constant feedback between growth and…

Physics and Society · Physics 2025-03-20 Alain Govaert , André Teixeira , Emma Tegling

Ecological networks describe the interactions between different species, informing us of how they rely on one another for food, pollination and survival. If a species in an ecosystem is under threat of extinction, it can affect other…

Populations and Evolution · Quantitative Biology 2023-07-06 Chris Jones , Damaris Zurell , Karoline Wiesner

We study the effect of speciation, i.e. the introduction of new species through evolution into communities, in the setting of predator-prey systems. Predator-prey dynamics is classically well modeled by Lotka-Volterra equations, also when…

Populations and Evolution · Quantitative Biology 2025-03-20 Christian Hamster , Jorik Schaap , Peter van Heijster , Joshua Dijksman

Local coexistence of species in large ecosystems is traditionally explained within the broad framework of niche theory. However, its rationale hardly justifies rich biodiversity observed in nearly homogeneous environments. Here we consider…

Populations and Evolution · Quantitative Biology 2021-11-17 Deepak Gupta , Stefano Garlaschi , Samir Suweis , Sandro Azaele , Amos Maritan

How does the shape of a network change as its size increases? Although random graph models provide some expectations for such "scaling behaviors" in the structure of networks, relatively little is known about how empirical network structure…

Social and Information Networks · Computer Science 2026-03-24 Upasana Dutta , Alexander Ray , Aaron Clauset

The recent discovery of universal principles underlying many complex networks occurring across a wide range of length scales in the biological world has spurred physicists in trying to understand such features using techniques from…

Biological Physics · Physics 2015-05-13 Sitabhra Sinha

Disordered systems theory provides powerful tools to analyze the generic behaviors of highdimensional systems, such as species-rich ecological communities or neural networks. By assuming randomness in their interactions, universality…

Populations and Evolution · Quantitative Biology 2025-03-20 Juan Giral Martínez

We use dynamical generating functionals to study the stability and size of communities evolving in Lotka-Volterra systems with random interaction coefficients. The size of the eco-system is not set from the beginning. Instead, we start from…

Populations and Evolution · Quantitative Biology 2018-10-17 Tobias Galla

We consider a multi-species community modelled as a complex network of populations, where the links are given by a random asymmetric matrix J, with fraction 1-C of zero entries, where C reflects the over-all connectivity of the system. The…

Biological Physics · Physics 2015-12-31 Anshul Choudhary , Sudeshna Sinha

We propose a novel network growth model coupled with the competition interaction to simulate macroevolution. Our work shows that the competition plays an important role in macroevolution and it is more rational to describe the interaction…

Populations and Evolution · Quantitative Biology 2007-07-11 Shao-Meng Qin , Yong Chen , Pan Zhang

The role of species interactions in controlling the interplay between the stability of an ecosystem and its biodiversity is still not well understood. The ability of ecological communities to recover after a small perturbation of the…

Populations and Evolution · Quantitative Biology 2016-06-15 Jacopo Grilli , Matteo Adorisio , Samir Suweis , György Barabás , Jayanth R. Banavar , Stefano Allesina , Amos Maritan

For taxonomic levels higher than species, the abundance distributions of number of subtaxa per taxon tend to approximate power laws, but often show strong deviationns from such a law. Previously, these deviations were attributed to…

Biological Physics · Physics 2009-11-06 Johan Chu , Chris Adami
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