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Related papers: Dynamics of clade diversification on the morpholog…

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Phylogenetic mixture models, in which the sites in sequences undergo different substitution processes along the same or different trees, allow the description of heterogeneous evolutionary processes. As data sets consisting of longer…

Populations and Evolution · Quantitative Biology 2012-07-17 Elizabeth S. Allman , John A. Rhodes , Seth Sullivant

In the past years, a remarkable mapping has been found between the dynamics of a population of M individuals undergoing random mutations and selection, and that of a single system in contact with a thermal bath with temperature 1/M. This…

Statistical Mechanics · Physics 2015-07-28 Tommaso Brotto , Guy Bunin , Jorge Kurchan

When beneficial mutations are relatively common, competition between multiple unfixed mutations can reduce the rate of fixation in well-mixed asexual populations. We introduce a one dimensional model with a steady accumulation of beneficial…

Populations and Evolution · Quantitative Biology 2013-02-19 Jakub Otwinowski , Stefan Boettcher

We have studied the evolution of galaxian morphologies from ground-based, good-seeing images of 9 clusters at z=0.09-0.25. The comparison of our data with those relative to higher redshift clusters (Dressler et al. 1997) allowed us to trace…

Geographic ranges of communities of species evolve in response to environmental, ecological, and evolutionary forces. Understanding the effects of these forces on species' range dynamics is a major goal of spatial ecology. Previous…

Populations and Evolution · Quantitative Biology 2022-02-02 Farshad Shirani , Judith R. Miller

The existence of heterogeneity in the dynamics of supercooled liquids is believed to be one of the hallmarks of the glass transition. Intense research has been carried out in the past to understand the origin of this heterogeneity in…

Soft Condensed Matter · Physics 2020-07-01 Indrajit Tah , Smarajit Karmakar

By means of the isoconfigurational method we calculate the change in the propensity for motion that the structure of a glass-forming system experiences during its relaxation dynamics. The relaxation of such a system has been demonstrated to…

Soft Condensed Matter · Physics 2008-10-09 J. A. Rodriguez Fris , L. M. Alarcón , G. A. Appignanesi

Modeling the spontaneous evolution of morphology in natural systems and its preservation by proportionate growth remains a major scientific challenge. Yet, it is conceivable that if the basic mechanisms of growth and the coupled kinetic…

Soft Condensed Matter · Physics 2020-12-30 Virginia von Streng , Rami Abi-Akl , Bianca Giovanardi , Tal Cohen

Speciation is often associated with geographical barriers that limit gene flow. However, species can also emerge in continuous homogeneous environments through isolation by distance. When the environment is not homogeneous, natural…

Populations and Evolution · Quantitative Biology 2026-03-24 Lara D. Hissa , Flavia M. D. Marquitti , Marcus A. M. de Aguiar

Cells generally change their internal state to adapt to an environmental change, and accordingly evolve in response to the new conditions. This process involves phenotypic changes that occur over several different time scales, ranging from…

Populations and Evolution · Quantitative Biology 2015-02-03 Chikara Furusawa , Kunihiko Kaneko

Laboratory experiments with bacterial colonies, under well-controlled conditions often lead to evolutionary diversification, where at least two ecotypes emerge from an initially monomorphic population. Empirical evidence suggests that such…

Populations and Evolution · Quantitative Biology 2024-11-06 Roberto Corral López , Samir Suweis , Sandro Azaele , Miguel A. Muñoz

Natural ecosystems are characterized by striking diversity of form and functions and yet exhibit deep symmetries emerging across scales of space, time and organizational complexity. Species-area relationships and species-abundance…

The deep-water fauna of the Mediterranean is characterized by an absence of distinctive characteristics and by a relative impoverishment. Both are a result of events after the Messinian salinity crisis (Late Miocene). The three main classes…

Populations and Evolution · Quantitative Biology 2019-05-01 Christian Emig , Patrick Geistdoerfer

We study the effect of spatial structure, genetic drift, mutation, and selective pressure on the evolutionary dynamics in a simplified model of asexual organisms colonizing a new territory. Under an appropriate coarse-graining, the…

Statistical Mechanics · Physics 2013-01-15 Maxim O. Lavrentovich , Kirill S. Korolev , David R. Nelson

The mechanical behaviour of solid biological tissues has long been described using models based on classical continuum mechanics. However, the classical continuum theories of elasticity and viscoelasticity cannot easily capture the…

Biological Physics · Physics 2017-05-16 Shakti N. Menon , Cameron L. Hall , Scott W. McCue , D. L. Sean McElwain

Continuing generation of novelty, complexity, and adaptation are well-established as core aspects of open-ended evolution. However, it has yet to be firmly established to what extent these phenomena are coupled and by what means they…

Neural and Evolutionary Computing · Computer Science 2025-09-05 Matthew Andres Moreno , Santiago Rodriguez Papa , Charles Ofria

Periodicity in population dynamics is a fundamental issue. In addition to current species-specific analyses, allometry facilitates understanding of limit cycles amongst different species. So far, body-size regressions have been derived for…

Quantitative Methods · Quantitative Biology 2010-04-23 Christian Mulder , A. Jan Hendriks

We use a combination of analytic models and computer simulations to gain insight into the dynamics of evolution. Our results suggest that certain interesting phenomena should eventually emerge from the fossil record. For example, there…

Populations and Evolution · Quantitative Biology 2007-05-23 Stuart Samuel , Gezhi Weng

This series of papers is intended to evaluate astrocladistics in reconstructing phylogenies of galaxies. The objective of this second paper is to formalize the concept of galaxy formation and to identify the processes of diversification. We…

Astrophysics · Physics 2007-05-23 Didier Fraix-Burnet , Emmanuel J. P. Douzery , Philippe Choler , Anne Verhamme

I review recent observational progress concerning the evolution of the morphological distribution of galaxies in the rich cluster environment and in the faint field population. By coupling HST imagery with ground-based spectroscopic…

Astrophysics · Physics 2007-05-23 Richard S Ellis