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We analyze the nonlinear relaxation of a complex ecosystem composed of many interacting species. The ecological system is described by generalized Lotka-Volterra equations with a multiplicative noise. The transient dynamics is studied in…

Statistical Mechanics · Physics 2016-11-23 M. A. Cirone , F. de Pasquale , B. Spagnolo

Interactions in natural communities can be highly heterogeneous, with any given species interacting appreciably with only some of the others, a situation commonly represented by sparse interaction networks. We study the consequences of…

Populations and Evolution · Quantitative Biology 2022-10-12 Stav Marcus , Ari M. Turner , Guy Bunin

Collective motion by animal groups is affected by internal interactions, external constraints and the influx of information. A quantitative understanding of how these different factors give rise to different modes of collective motion is,…

Biological Physics · Physics 2021-07-21 Aviram Gelblum , Itai Pinkoviezky , Ehud Fonio , Nir S. Gov , Ofer Feinerman

Neutral models, in which individual agents with equal fitness undergo a birth-death-mutation process, are very popular in population genetics and community ecology. Usually these models are applied to populations and communities with…

Populations and Evolution · Quantitative Biology 2016-06-10 Matan Danino , Yahav Shem-Tov , Nadav M. Shnerb

Models in evolutionary game theory traditionally assume symmetric interactions in homogeneous environments. Here, we consider populations evolving in a heterogeneous environment, which consists of patches of different qualities that are…

Populations and Evolution · Quantitative Biology 2018-12-11 Christoph Hauert , Camille Saade , Alex McAvoy

Understanding the influence of structure of dispersal network on the species persistence and modeling a much realistic species dispersal in nature are two central issues in spatial ecology. A realistic dispersal structure which favors the…

Adaptation and Self-Organizing Systems · Physics 2017-10-18 Anubhav Gupta , Tanmoy Banerjee , Partha Sharathi Dutta

We study a version of the Tangled Nature model of evolutionary ecology redefined in a phenotype space where mutants have properties correlated to their parents. The model has individual-based dynamics whilst incorporating species scale…

Populations and Evolution · Quantitative Biology 2016-09-08 Simon Laird , Henrik Jeldtoft Jensen

We introduce a mathematical model of symbiosis between different species by taking into account the influence of each species on the carrying capacities of the others. The modeled entities can pertain to biological and ecological societies…

Biological Physics · Physics 2012-06-06 V. I. Yukalov , E. P. Yukalova , D. Sornette

Theoretical ecology has traditionally equated persistence with the stability of a fixed equilibrium point. Here we argue that the primary threat to ecosystem persistence need not be the loss of stability, but instead the escape of the…

Populations and Evolution · Quantitative Biology 2026-02-24 Cagatay Eskin , Vu Nguyen , Dervis Can Vural

Cyclic, nonhierarchical interactions among biological species represent a general mechanism by which ecosystems are able to maintain high levels of biodiversity. However, species coexistence is often possible only in spatially extended…

Populations and Evolution · Quantitative Biology 2015-03-17 Daniel Groselj , Frank Jenko , Erwin Frey

A spacially extended model of the collective behavior of a large number of locally acting organisms is proposed in which organisms move probabilistically between local cells in space, but with weights dependent on local morphogenetic…

adap-org · Physics 2008-06-25 Mark M. Millonas

Sensory mechanisms in biology, from cells to humans, have the property of adaptivity, whereby the response produced by the sensor is adapted to the overall amplitude of the signal; reducing the sensitivity in the presence of strong…

Biological Physics · Physics 2017-04-26 Dan Gorbonos , Nir S. Gov

The consensus that complexity begets stability in ecosystems was challenged in the seventies, a result recently extended to ecologically-inspired networks. The approaches assume the existence of a feasible equilibrium, i.e. with positive…

Populations and Evolution · Quantitative Biology 2016-12-21 Michael Dougoud , Laura Vinckenbosch , Rudolf Rohr , Louis-Félix Bersier , Christian Mazza

Having control over species abundances and community resilience is of great interest for experimental, agricultural, industrial and conservation purposes. Here, we theoretically explore the possibility of manipulating ecological communities…

Populations and Evolution · Quantitative Biology 2020-01-31 Vu AT Nguyen , Dervis Can Vural

This is the first of two papers where we discuss the limits imposed by competition to the biodiversity of species communities. In this first paper we study the coexistence of competing species at the fixed point of population dynamic…

Populations and Evolution · Quantitative Biology 2007-05-23 Ugo Bastolla , Michael Lässig , Susanna C. Manrubia , Angelo Valleriani

Modern ecology has re-emphasized the need for a quantitative understanding of the original 'survival of the fittest theme' based on analyzis of the intricate trade-offs between competing evolutionary strategies that characterize the…

Populations and Evolution · Quantitative Biology 2015-06-16 Jacopo Grilli , Samir Suweis , Amos Maritan

The role of the selection pressure and mutation amplitude on the behavior of a single-species population evolving on a two-dimensional lattice, in a periodically changing environment, is studied both analytically and numerically. The…

Populations and Evolution · Quantitative Biology 2009-11-13 Ioana Bena , Michel Droz , Janusz Szwabinski , Andrzej Pekalski

In the analysis of complex ecosystems it is common to use random interaction coefficients, often assumed to be such that all species are statistically equivalent. In this work we relax this assumption by choosing interactions according to…

Populations and Evolution · Quantitative Biology 2023-03-08 Lyle Poley , Joseph W. Baron , Tobias Galla

Using elementary distributed computing techniques we suggest an explanation for two unexplained phenomena in regards to ant colonies, (a) a substantial amount of ants in an ant colony are idle, and (b) the observed low survivability of new…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-05-23 Yehuda Afek , Deborah M. Gordon , Moshe Sulamy

Preserving biodiversity and ecosystem stability is a challenge that can be pursued through modern statistical mechanics modeling. Here we introduce a variational maximum entropy-based algorithm to evaluate the entropy in a minimal ecosystem…

Biological Physics · Physics 2018-10-17 Mattia Miotto , Lorenzo Monacelli