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We investigate symbolic sequences and in particular information carriers as e.g. books and DNA-strings. First the higher order Shannon entropies are calculated, a characteristic root law is detected. Then the algorithmic entropy is…

Disordered Systems and Neural Networks · Physics 2007-05-23 Werner Ebeling , Alexander Neiman , Thorsten Poeschel

The goal of this paper is to develop an estimate for the entropy of random long-range correlated symbolic sequences with elements belonging to a finite alphabet. As a plausible model, we use the high-order additive stationary ergodic Markov…

Information Theory · Computer Science 2014-12-12 S. S. Melnik , O. V. Usatenko

We discuss algorithms for estimating the Shannon entropy h of finite symbol sequences with long range correlations. In particular, we consider algorithms which estimate h from the code lengths produced by some compression algorithm. Our…

Statistical Mechanics · Physics 2017-04-24 Thomas Schürmann , Peter Grassberger

Recently long range correlations were detected in nucleotide sequences and in human writings by several authors. We undertake here a systematic investigation of two books, Moby Dick by H. Melville and Grimm's tales, with respect to the…

chao-dyn · Physics 2009-10-22 Werner Ebeling , Thorsten Pöschel

A new approach to estimate the Shannon entropy of a long-range correlated sequence is proposed. The entropy is written as the sum of two terms corresponding respectively to power-law (\emph{ordered}) and exponentially (\emph{disordered})…

Genomics · Quantitative Biology 2013-10-30 Anna Carbone

We investigate the longest common substring problem for encoded sequences and its asymptotic behaviour. The main result is a strong law of large numbers for a re-scaled version of this quantity, which presents an explicit relation with the…

Probability · Mathematics 2019-12-12 Adriana Coutinho , Rodrigo Lambert , Jérôme Rousseau

We investigated long range correlations in two literary texts, Moby Dick by H. Melville and Grimm's tales. The analysis is based on the calculation of entropy like quantities as the mutual information for pairs of letters and the entropy,…

Disordered Systems and Neural Networks · Physics 2015-06-24 Werner Ebeling , Thorsten Poeschel

The origin of long-range letter correlations in natural texts is studied using random walk analysis and Jensen-Shannon divergence. It is concluded that they result from slow variations in letter frequency distribution, which are a…

Computation and Language · Computer Science 2016-11-27 Dmitrii Y. Manin

We investigate correlations in information carriers, e.g. texts and pieces of music, which are represented by strings of letters. For information carrying strings generated by one source (i.e. a novel or a piece of music) we find…

Statistical Mechanics · Physics 2007-05-23 Werner Ebeling , Thorsten Poeschel , Karl-Friedrich Albrecht

Quantifying the similarity between symbolic sequences is a traditional problem in Information Theory which requires comparing the frequencies of symbols in different sequences. In numerous modern applications, ranging from DNA over music to…

Physics and Society · Physics 2016-04-18 Martin Gerlach , Francesc Font-Clos , Eduardo G. Altmann

Entropy rate of sequential data-streams naturally quantifies the complexity of the generative process. Thus entropy rate fluctuations could be used as a tool to recognize dynamical perturbations in signal sources, and could potentially be…

Information Theory · Computer Science 2014-03-24 Ishanu Chattopadhyay , Hod Lipson

We analyze the structure of DNA molecules of different organisms by using the additive Markov chain approach. Transforming nucleotide sequences into binary strings, we perform statistical analysis of the corresponding "texts". We develop…

Other Quantitative Biology · Quantitative Biology 2014-11-14 S. S. Melnik , O. V. Usatenko

We use large language models (LLMs) to uncover long-ranged structure in English texts from a variety of sources. The conditional entropy or code length in many cases continues to decrease with context length at least to $N\sim 10^4$…

Statistical Mechanics · Physics 2026-01-01 Colin Scheibner , Lindsay M. Smith , William Bialek

We develop an instanton technique for calculations of correlation functions characterizing statistical behavior of the elastic string in disordered media and apply the proposed approach to correlations of string free energies corresponding…

Soft Condensed Matter · Physics 2009-11-07 Ya. M. Blanter , V. M. Vinokur

Symbolic sequences such as written language and genomic DNA display characteristic frequency distributions and long-range correlations extending over many symbols. In language, this takes the form of Zipf's law for word frequencies together…

Computation and Language · Computer Science 2026-03-04 Marcelo A. Montemurro , Mirko Degli Esposti

We prime-encode the natural numbers via recursive factorisation, iterated to the exponents, generating a corpus of planar rooted trees equivalently represented as Dyck words. This forms a deterministic text endowed with internal rules.…

Mathematical Physics · Physics 2025-12-02 Pierluigi Contucci , Claudio Giberti , Godwin Osabutey , Cecilia Vernia

Consider two independent random strings having same length and taking values uniformly in a common finite alphabet. We study the order of the variance of the length of the longest common subsequences (LCS) of these strings when long blocks,…

Probability · Mathematics 2016-09-26 S. Amsalu , C. Houdré , H. Matzinger

We study a quantity called discrete layered entropy, which approximates the Shannon entropy within a logarithmic gap. Compared to the Shannon entropy, the discrete layered entropy is piecewise linear, approximates the expected length of the…

Information Theory · Computer Science 2026-01-27 Cheuk Ting Li

How does the information flow between different brain regions during various stimuli? This is the question we aim to address by studying complex cognitive paradigms in terms of Information Theory. To assess creativity and the emergence of…

Neurons and Cognition · Quantitative Biology 2025-07-08 Ania Mesa-Rodríguez , Ernesto Estevez-Rams , Holger Kantz

Non-equilibrium random fluctuations of non-thermal nature are a salient feature of active matter. In this work, we consider the collective excitations of active systems at high density, focusing on a one-dimensional chain of elastically…

Soft Condensed Matter · Physics 2024-01-17 Umberto Marini Bettolo Marconi , Hartmut Löwen , Lorenzo Caprini
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