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Graph neural networks (GNNs) have been predominantly driven by message-passing, where node representations are iteratively updated via local neighborhood aggregation. Despite their success, message-passing suffers from fundamental…

Machine Learning · Computer Science 2025-12-16 Zehong Wang , Zheyuan Zhang , Tianyi Ma , Chuxu Zhang , Yanfang Ye

Graph Transformers (GTs) have demonstrated great effectiveness across various graph analytical tasks. However, the existing GTs focus on training and testing graph data originated from the same distribution, but fail to generalize under…

Machine Learning · Computer Science 2026-03-16 Tianyin Liao , Ziwei Zhang , Yufei Sun , Chunyu Hu , Jianxin Li

Pretraining plays a pivotal role in acquiring generalized knowledge from large-scale data, achieving remarkable successes as evidenced by large models in CV and NLP. However, progress in the graph domain remains limited due to fundamental…

Artificial Intelligence · Computer Science 2024-06-21 Yu Song , Haitao Mao , Jiachen Xiao , Jingzhe Liu , Zhikai Chen , Wei Jin , Carl Yang , Jiliang Tang , Hui Liu

Transformers serve as the backbone architectures of Foundational Models, where domain-specific tokenizers allow them to adapt to various domains. Graph Transformers (GTs) have recently emerged as leading models in geometric deep learning,…

Neural and Evolutionary Computing · Computer Science 2025-04-03 Limei Wang , Kaveh Hassani , Si Zhang , Dongqi Fu , Baichuan Yuan , Weilin Cong , Zhigang Hua , Hao Wu , Ning Yao , Bo Long

Score-based diffusion models in infinite-dimensional function spaces provide a mathematically principled framework for modelling function-valued data, offering key advantages such as resolution invariance and the ability to handle irregular…

Machine Learning · Computer Science 2026-05-06 James Rowbottom , Elizabeth L. Baker , Nick Huang , Ben Adcock , Carola-Bibiane Schönlieb , Alexander Denker

Graph foundation models represent a transformative paradigm for learning transferable representations across diverse graph domains. Recent methods leverage large language models to unify graph and text modalities into a shared…

Machine Learning · Computer Science 2025-12-23 Heng Zhang , Tianyi Zhang , Yuling Shi , Xiaodong Gu , Yaomin Shen , Haochen You , Zijian Zhang , Yilei Yuan , Jin Huang

Graph diffusion models have gained significant attention in graph generation tasks, but they often inherit and amplify topology biases from sensitive attributes (e.g. gender, age, region), leading to unfair synthetic graphs. Existing fair…

Machine Learning · Computer Science 2026-03-03 Wendi Wang , Jiaxi Yang , Yongkang Du , Lu Lin

Graph neural networks (GNNs) are shown to be successful in modeling applications with graph structures. However, training an accurate GNN model requires a large collection of labeled data and expressive features, which might be inaccessible…

Machine Learning · Computer Science 2019-06-03 Ziniu Hu , Changjun Fan , Ting Chen , Kai-Wei Chang , Yizhou Sun

Graph Fourier transform (GFT) is a fundamental concept in graph signal processing. In this paper, based on singular value decomposition of Laplacian, we introduce a novel definition of GFT on directed graphs, and use singular values of…

Signal Processing · Electrical Eng. & Systems 2022-05-13 Yang Chen , Cheng Cheng , Qiyu Sun

Spectral graph embedding plays a critical role in graph representation learning by generating low-dimensional vector representations from graph spectral information. However, the embedding space of traditional spectral embedding methods…

Machine Learning · Computer Science 2026-05-19 Changjie Sheng , Zhichao Zhang , Yangfan He

Graph neural networks (GNNs) have significantly improved the representation power for graph-structured data. Despite of the recent success of GNNs, the graph convolution in most GNNs have two limitations. Since the graph convolution is…

Machine Learning · Computer Science 2021-12-30 Jinyoung Park , Sungdong Yoo , Jihwan Park , Hyunwoo J. Kim

Graph signal processing extends spectral analysis to data supported on irregular domains. Existing fractional transforms for two-dimensional graph signals, including the two-dimensional graph fractional Fourier transform (GFRFT), typically…

Signal Processing · Electrical Eng. & Systems 2026-03-03 Mingzhi Wang , Manjun Cui , Feiyue Zhao , Yangfan He , Zhichao Zhang

Foundation models have achieved remarkable success across many domains, relying on pretraining over vast amounts of data. Graph-structured data often lacks the same scale as unstructured data, making the development of graph foundation…

Foundation models have recently emerged as a new paradigm in machine learning (ML). These models are pre-trained on large and diverse datasets and can subsequently be applied to various downstream tasks with little or no retraining. This…

Cryptography and Security · Computer Science 2025-04-21 Corentin Larroche

In reliable decision-making systems based on machine learning, models have to be robust to distributional shifts or provide the uncertainty of their predictions. In node-level problems of graph learning, distributional shifts can be…

Machine Learning · Computer Science 2023-11-02 Gleb Bazhenov , Denis Kuznedelev , Andrey Malinin , Artem Babenko , Liudmila Prokhorenkova

Contemporary data is often supported by an irregular structure, which can be conveniently captured by a graph. Accounting for this graph support is crucial to analyze the data, leading to an area known as graph signal processing (GSP). The…

Information Theory · Computer Science 2017-05-26 Geert Leus , Santiago Segarra , Alejandro Ribeiro , Antonio G. Marques

Graph neural networks (GNNs) have received tremendous attention due to their superiority in learning node representations. These models rely on message passing and feature transformation functions to encode the structural and feature…

Machine Learning · Computer Science 2021-12-02 Kai Guo , Kaixiong Zhou , Xia Hu , Yu Li , Yi Chang , Xin Wang

Recent advancements in large-scale pre-training have shown the potential to learn generalizable representations for downstream tasks. In the graph domain, however, capturing and transferring structural information across different graph…

Machine Learning · Computer Science 2026-02-24 Jialin Chen , Haolan Zuo , Haoyu Peter Wang , Siqi Miao , Pan Li , Rex Ying

Graph convolutional networks (GCNs) are a family of neural network models that perform inference on graph data by interleaving vertex-wise operations and message-passing exchanges across nodes. Concerning the latter, two key questions…

Machine Learning · Computer Science 2020-09-29 Indro Spinelli , Simone Scardapane , Aurelio Uncini

We present the Graph Forward-Forward (GFF) algorithm, an extension of the Forward-Forward procedure to graphs, able to handle features distributed over a graph's nodes. This allows training graph neural networks with forward passes only,…

Machine Learning · Computer Science 2023-02-13 Daniele Paliotta , Mathieu Alain , Bálint Máté , François Fleuret
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