Related papers: Exact Solution of the Discrete Wormlike Chain Mode…
In this paper we study a catalytically-activated A + A \to 0 reaction taking place on a one-dimensional regular lattice which is brought in contact with a reservoir of A particles. The A particles have a hard-core and undergo continuous…
Folding of the triangular lattice in a discrete three-dimensional space is investigated numerically. Such ``discrete folding'' has come under through theoretical investigation, since Bowick and co-worker introduced it as a simplified model…
The paper outlines an exact combinatorial approach to finite coagulating systems. In this approach, cluster sizes and time are discrete, and the binary aggregation alone governs the time evolution of the systems. By considering the growth…
The Discrete Particle Method (DPM) is used to model granular flows down an inclined chute. We observe three major regimes: static piles, steady uniform flows and accelerating flows. For flows over a smooth base, other (quasi-steady) regimes…
We present a simple recipe to construct exactly and quasi-exactly solvable Hamiltonians in one-dimensional `discrete' quantum mechanics, in which the Schr\"{o}dinger equation is a difference equation. It reproduces all the known ones whose…
The elastic properties of semiflexible polymers are of great importance in biology. There are experiments on biopolymers like double stranded DNA, which twist and stretch single molecules to probe their elastic properties. It is known that…
Dynamic density functionals (DDFs) are popular tools for studying the dynamical evolution of inhomogeneous polymer systems. Here, we present a systematic evaluation of a set of diffusive DDF theories by comparing their predictions with data…
We present a set of molecular dynamics (MD) simulations of strongly charged, flexible polyelectrolyte chains under poor solvent conditions in a salt free solution. Structural properties of the chains and of the solutions are reported. By…
The one dimensional direct polymer in random media model is investigated using a variational approach in the replica space. We demonstrate numerically that the stable point is a maximum and the corresponding statistical properties for the…
Active matter swarms -- collectives of self-propelled particles that could self-assemble, ferry microscopic cargo, or endow materials with dynamic properties -- remain hard to steer. In crowded systems, tracking or controlling individual…
Entanglement plays a prominent role in the study of condensed matter many-body systems: Entanglement measures not only quantify the possible use of these systems in quantum information protocols, but also shed light on their physics.…
The collapse and swelling behavior of a generic homopolymer is studied using implicit-solvent, explicit-cosolvent Langevin dynamics computer simulations for varying interaction strengths. The systematic investigation reveals that polymer…
The full discretization of the semi-linear stochastic wave equation is considered. The discontinuous Galerkin finite element method is used in space and analyzed in a semigroup framework, and an explicit stochastic position Verlet scheme is…
We analyze static properties of a strongly confined semiflexible polymer, i.e. either trapped in a closed space or compressed by external forces, in an athermal solvent. Like a flexible polymer case, we can resort to an analogy with the…
In this paper, we propose a discrete perfectly matched layer (PML) for the peridynamic scalar wave-type problems in viscous media. Constructing PMLs for nonlocal models is often challenging, mainly due to the fact that nonlocal operators…
We develop a rigorous theory for a structure-preserving discretisation of the incompressible Euler and Navier--Stokes equations, based on discrete exterior calculus on prismatic Delaunay--Voronoi meshes over closed Riemannian manifolds. The…
This work continues the study started in \cite{Povolotsky2021}, where the exact densities of loops in the O(1) dense loop model on an infinite strip of the square lattice with periodic boundary conditions were obtained. These densities are…
In this chapter we review the rich behavior of polymer chains embedded in a quenched random environment. We first consider the problem of a Gaussian chain free to move in a random potential with short-ranged correlations. We derive the…
For one-dimensional spin and pseudospin models that allow mapping to a Markov chain, the free energy of the system at a finite temperature can be expressed in terms of bond concentrations. Minimizing the free energy function makes it…
We show that Kramers rate theory gives a straightforward, accurate estimate of the closing time $\tau_c$ of a semiflexible polymer that is valid in cases of physical interest. The calculation also reveals how the time scales of chain…