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Sparse Autoencoders (SAEs) have become an important tool in mechanistic interpretability, helping to analyze internal representations in both Large Language Models (LLMs) and Vision Transformers (ViTs). By decomposing polysemantic…

Machine Learning · Computer Science 2026-05-11 Jakub Stępień , Marcin Mazur , Jacek Tabor , Przemysław Spurek

Sparse autoencoders (SAEs) have been applied to large language models and protein language models, but not systematically to electronic health record (EHR) foundation models. We train TopK SAEs on FlatASCEND, a 14.5-million-parameter…

Machine Learning · Computer Science 2026-05-07 Chris Sainsbury , Feng Dong , Andreas Karwath

Sparse autoencoders (SAEs) operationalise the linear representation hypothesis: they reconstruct model activations as sparse linear combinations of interpretable dictionary atoms, on the implicit assumption that activation space is well…

Machine Learning · Computer Science 2026-05-12 Eslam Zaher , Maciej Trzaskowski , Quan Nguyen , Fred Roosta

We introduce a neural-network architecture, termed the constrained recurrent sparse autoencoder (CRsAE), that solves convolutional dictionary learning problems, thus establishing a link between dictionary learning and neural networks.…

Machine Learning · Computer Science 2020-10-20 Bahareh Tolooshams , Sourav Dey , Demba Ba

Sparse auto-encoders are useful for extracting low-dimensional representations from high-dimensional data. However, their performance degrades sharply when the input noise at test time differs from the noise employed during training. This…

Machine Learning · Computer Science 2024-07-01 Nelson Goldenstein , Jeremias Sulam , Yaniv Romano

We study the challenge of achieving theoretically grounded feature recovery using Sparse Autoencoders (SAEs) for the interpretation of Large Language Models. Existing SAE training algorithms often lack rigorous mathematical guarantees and…

Machine Learning · Computer Science 2025-06-18 Siyu Chen , Heejune Sheen , Xuyuan Xiong , Tianhao Wang , Zhuoran Yang

Sparse Auto-Encoders (SAEs) are commonly employed in mechanistic interpretability to decompose the residual stream into monosemantic SAE latents. Recent work demonstrates that perturbing a model's activations at an early layer results in a…

Machine Learning · Computer Science 2024-11-19 Giorgi Giglemiani , Nora Petrova , Chatrik Singh Mangat , Jett Janiak , Stefan Heimersheim

Dense embeddings deliver strong retrieval performance but often lack interpretability and controllability. This paper introduces a novel approach using sparse autoencoders (SAE) to interpret and control dense embeddings via the learned…

Information Retrieval · Computer Science 2025-02-25 Hao Kang , Tevin Wang , Chenyan Xiong

Given a convolutional dictionary underlying a set of observed signals, can a carefully designed auto-encoder recover the dictionary in the presence of noise? We introduce an auto-encoder architecture, termed constrained recurrent sparse…

Machine Learning · Computer Science 2018-07-13 Bahareh Tolooshams , Sourav Dey , Demba Ba

Sparse auto-encoders (SAEs) have re-emerged as a prominent method for mechanistic interpretability, yet they face two significant challenges: the non-smoothness of the $L_1$ penalty, which hinders reconstruction and scalability, and a lack…

Artificial Intelligence · Computer Science 2026-05-19 Ouns El Harzli , Hugo Wallner , Yoonsoo Nam , Haixuan Xavier Tao

Shape illustration images (SIIs) are common and important in describing the cross-sections of industrial products. Same as MNIST, the handwritten digit images, SIIs are gray or binary and containing shapes that are surrounded by large areas…

Image and Video Processing · Electrical Eng. & Systems 2020-02-07 Qianwei Zhou , Peng Tao , Xiaoxin Li , Shengyong Chen , Fan Zhang , Haigen Hu

As large language models (LLMs) grow in scale and capability, understanding their internal mechanisms becomes increasingly critical. Sparse autoencoders (SAEs) have emerged as a key tool in mechanistic interpretability, enabling the…

Computation and Language · Computer Science 2025-06-10 Jiaming Li , Haoran Ye , Yukun Chen , Xinyue Li , Lei Zhang , Hamid Alinejad-Rokny , Jimmy Chih-Hsien Peng , Min Yang

Sparse autoencoders (SAEs) are widely used to extract sparse, interpretable latents from transformer activations. We test whether commonly used SAE quality metrics and automatic explanation pipelines can distinguish trained transformers…

Machine Learning · Computer Science 2026-01-28 Thomas Heap , Tim Lawson , Lucy Farnik , Laurence Aitchison

For large language models (LLMs), sparse autoencoders (SAEs) have been shown to decompose intermediate representations that often are not interpretable directly into sparse sums of interpretable features, facilitating better control and…

Adapting foundation models for specific purposes has become a standard approach to build machine learning systems for downstream applications. Yet, it is an open question which mechanisms take place during adaptation. Here we develop a new…

Computer Vision and Pattern Recognition · Computer Science 2025-03-24 Hyesu Lim , Jinho Choi , Jaegul Choo , Steffen Schneider

Sparse autoencoders (SAEs) have emerged as a promising approach for learning interpretable features from neural network activations. However, the optimization landscape for SAE training can be challenging due to correlations in the input…

Machine Learning · Computer Science 2025-11-19 Ashwin Saraswatula , David Klindt

Sparse autoencoders are a promising new approach for decomposing language model activations for interpretation and control. They have been applied successfully to vision transformer image encoders and to small-scale diffusion models.…

Machine Learning · Computer Science 2025-07-14 Stepan Shabalin , Ayush Panda , Dmitrii Kharlapenko , Abdur Raheem Ali , Yixiong Hao , Arthur Conmy

While the activations of neurons in deep neural networks usually do not have a simple human-understandable interpretation, sparse autoencoders (SAEs) can be used to transform these activations into a higher-dimensional latent space which…

Machine Learning · Computer Science 2025-08-07 Gonçalo Paulo , Alex Mallen , Caden Juang , Nora Belrose

Large Language Models (LLMs) encode factual knowledge within hidden parametric spaces that are difficult to inspect or control. While Sparse Autoencoders (SAEs) can decompose hidden activations into more fine-grained, interpretable…

Machine Learning · Computer Science 2026-01-14 Minglai Yang , Xinyu Guo , Zhengliang Shi , Jinhe Bi , Steven Bethard , Mihai Surdeanu , Liangming Pan

Sparse autoencoders (SAEs) have lately been used to uncover interpretable latent features in large language models. By projecting dense embeddings into a much higher-dimensional and sparse space, learned features become disentangled and…

Machine Learning · Computer Science 2025-07-30 Viktoria Schuster