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This paper describes a system capable of semi-automatically filling an XML template from free texts in the clinical domain (practice guidelines). The XML template includes semantic information not explicitly encoded in the text (pairs of…

Artificial Intelligence · Computer Science 2015-05-13 Amanda Bouffier

There is a long history of building predictive models in healthcare using tabular data from electronic medical records. However, these models fail to extract the information found in unstructured clinical notes, which document diagnosis,…

Computation and Language · Computer Science 2025-04-18 David Anderson , Michaela Anderson , Margret Bjarnadottir , Stephen Mahar , Shriyan Reyya

Global healthcare providers are exploring use of large language models (LLMs) to provide medical advice to the public. LLMs now achieve nearly perfect scores on medical licensing exams, but this does not necessarily translate to accurate…

Recent advances in deep learning and natural language generation have significantly improved image captioning, enabling automated, human-like descriptions for visual content. In this work, we apply these captioning techniques to generate…

Computation and Language · Computer Science 2024-12-06 Amnon Bleich , Antje Linnemann , Bjoern H. Diem , Tim OF Conrad

Causal inference is essential for decision-making but remains challenging for non-experts. While large language models (LLMs) show promise in this domain, their precise causal estimation capabilities are still limited, and the impact of…

Computation and Language · Computer Science 2026-02-09 Junqi Chen , Sirui Chen , Chaochao Lu

The capabilities and limitations of Large Language Models have been sketched out in great detail in recent years, providing an intriguing yet conflicting picture. On the one hand, LLMs demonstrate a general ability to solve problems. On the…

Recent progress in Large Vision-Language Models (LVLMs) has enabled promising applications in medical tasks, such as report generation and visual question answering. However, existing benchmarks focus mainly on the final diagnostic answer,…

Computer Vision and Pattern Recognition · Computer Science 2025-10-28 Hyungyung Lee , Geon Choi , Jung-Oh Lee , Hangyul Yoon , Hyuk Gi Hong , Edward Choi

In the past decades, recommender systems have attracted much attention in both research and industry communities, and a large number of studies have been devoted to developing effective recommendation models. Basically speaking, these…

Information Retrieval · Computer Science 2023-05-12 Junjie Zhang , Ruobing Xie , Yupeng Hou , Wayne Xin Zhao , Leyu Lin , Ji-Rong Wen

Despite the rapid expansion of Large Language Models (LLMs) in healthcare, robust and explainable evaluation of their ability to assess clinical trial reporting according to CONSORT standards remains an open challenge. In particular,…

Artificial Intelligence · Computer Science 2026-02-26 Sohyeon Jeon , Hyung-Chul Lee

Evidence-based medicine (EBM) holds a crucial role in clinical application. Given suitable medical articles, doctors effectively reduce the incidence of misdiagnoses. Researchers find it efficient to use large language models (LLMs)…

Computation and Language · Computer Science 2025-11-07 Mengzhou Sun , Sendong Zhao , Jianyu Chen , Haochun Wang , Bing Qin

Logical reasoning is fundamental for humans yet presents a substantial challenge in the domain of Artificial Intelligence. Initially, researchers used Knowledge Representation and Reasoning (KR) systems that did not scale and required…

Computation and Language · Computer Science 2024-04-02 Man Luo , Shrinidhi Kumbhar , Ming shen , Mihir Parmar , Neeraj Varshney , Pratyay Banerjee , Somak Aditya , Chitta Baral

OBJECTIVE: To design and evaluate new pharmacogenomic (PGx) clinical decision support (CDS) alerts, built to adhere to PGx CDS design principles developed through socio-technical approaches. MATERIALS AND METHODS: Based on previously…

Human-Computer Interaction · Computer Science 2025-05-06 Timothy M. Herr , Therese A. Nelson , Luke V. Rasmussen , Yinan Zheng , Nicola Lancki , Justin B. Starren

Medical education increasingly emphasizes students' ability to apply knowledge in real-world clinical settings, focusing on evidence-based clinical reasoning and differential diagnoses. Problem-based learning (PBL) addresses traditional…

Human-Computer Interaction · Computer Science 2025-03-11 Yuansong Xu , Yuheng Shao , Jiahe Dong , Shaohan Shi , Chang Jiang , Quan Li

Extracting insights from Electronic Health Record (EHR) databases often requires SQL expertise, creating a barrier for clinical decision-making and research. A promising approach is to use Large Language Models (LLMs) to translate natural…

Information Retrieval · Computer Science 2026-04-21 Hung Nguyen , Hans Moen , Pekka Marttinen

Clinical trial records are variable resources or the analysis of patients and diseases. Information extraction from free text such as eligibility criteria and summary of results and conclusions in clinical trials would better support…

Computation and Language · Computer Science 2020-01-01 Yingcheng Sun , Kenneth Loparo

Medical coding converts free-text clinical notes into standardized diagnostic and procedural codes, which are essential for billing, hospital operations, and medical research. Unlike ordinary text classification, it requires multi-step…

Artificial Intelligence · Computer Science 2025-11-18 Jiyang Zheng , Islam Nassar , Thanh Vu , Xu Zhong , Yang Lin , Tongliang Liu , Long Duong , Yuan-Fang Li

Medical question answering (QA) requires extensive access to domain-specific knowledge. A promising direction is to enhance large language models (LLMs) with external knowledge retrieved from medical corpora or parametric knowledge stored…

Computation and Language · Computer Science 2025-10-22 Lei Li , Xiao Zhou , Yingying Zhang , Xian Wu

Large language models (LLMs) achieve strong performance and have revolutionized NLP, but their lack of explainability keeps them treated as black boxes, limiting their use in domains that demand transparency and trust. A promising direction…

Computation and Language · Computer Science 2026-04-17 Bar Alon , Itamar Zimerman , Lior Wolf

This paper advances the state of the art in text understanding of medical guidelines by releasing two new annotated clinical guidelines datasets, and establishing baselines for using machine learning to extract condition-action pairs. In…

Computation and Language · Computer Science 2017-06-23 Hossein Hematialam , Wlodek Zadrozny

The integration of Large Language Models (LLMs) into healthcare is constrained by knowledge limitations, hallucinations, and a disconnect from Evidence-Based Medicine (EBM). While Retrieval-Augmented Generation (RAG) offers a solution,…

Computation and Language · Computer Science 2026-02-03 Qiaoyu Zheng , Yuze Sun , Chaoyi Wu , Weike Zhao , Pengcheng Qiu , Yongguo Yu , Kun Sun , Jian Zhang , Yanfeng Wang , Ya Zhang , Weidi Xie
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