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Data-driven prediction of molecular properties presents unique challenges to the design of machine learning methods concerning data structure/dimensionality, symmetry adaption, and confidence management. In this paper, we present a…

Machine Learning · Computer Science 2019-01-31 Yu-Hang Tang , Wibe A. de Jong

Diffusion-based classifiers such as those relying on the Personalized PageRank and the Heat kernel, enjoy remarkable classification accuracy at modest computational requirements. Their performance however is affected by the extent to which…

Machine Learning · Statistics 2019-02-20 Dimitris Berberidis , Athanasios N. Nikolakopoulos , Georgios B. Giannakis

Heat diffusion has been widely used in brain imaging for surface fairing, mesh regularization and cortical data smoothing. Motivated by diffusion wavelets and convolutional neural networks on graphs, we present a new fast and accurate…

Computer Vision and Pattern Recognition · Computer Science 2020-01-20 Shih-Gu Huang , Ilwoo Lyu , Anqi Qiu , Moo K. Chung

In this paper, we introduce a new (constructive) characterization of tight wavelet frames on non-flat domains in both continuum setting, i.e. on manifolds, and discrete setting, i.e. on graphs; discuss how fast tight wavelet frame…

Functional Analysis · Mathematics 2015-10-07 Bin Dong

In this paper we study heat kernels associated to a Carnot group $G$, endowed with a family of collapsing left-invariant Riemannian metrics $\sigma_\e$ which converge in the Gromov-Hausdorff sense to a sub-Riemannian structure on $G$ as…

Analysis of PDEs · Mathematics 2013-07-22 Luca Capogna , Giovanna Citti , Maria Manfredini

Diffusion maps are a commonly used kernel-based method for manifold learning, which can reveal intrinsic structures in data and embed them in low dimensions. However, as with most kernel methods, its implementation requires a heavy…

Machine Learning · Computer Science 2019-12-03 Scott Gigante , Jay S. Stanley , Ngan Vu , David van Dijk , Kevin Moon , Guy Wolf , Smita Krishnaswamy

Graph diffusion models have made significant progress in learning structured graph data and have demonstrated strong potential for predictive tasks. Existing approaches typically embed node, edge, and graph-level features into a unified…

Machine Learning · Computer Science 2025-12-12 Yisen Gao , Xingcheng Fu , Qingyun Sun , Jianxin Li , Xianxian Li

Physical systems with complex unsteady dynamics, such as fluid flows, are often poorly represented by a single mean solution. For many practical applications, it is crucial to access the full distribution of possible states, from which…

Computational Physics · Physics 2025-04-07 Mario Lino , Tobias Pfaff , Nils Thuerey

Simulation of conditioned diffusion processes is an essential tool in inference for stochastic processes, data imputation, generative modelling, and geometric statistics. Whilst simulating diffusion bridge processes is already difficult on…

Probability · Mathematics 2024-04-24 Erlend Grong , Karen Habermann , Stefan Sommer

In nonparametric regression, it is common for the inputs to fall in a restricted subset of Euclidean space. Typical kernel-based methods that do not take into account the intrinsic geometry of the domain across which observations are…

Methodology · Statistics 2021-11-04 David B Dunson , Hau-Tieng Wu , Nan Wu

Let $L_t:=\Delta_t +Z_t $, $t\in [0,T_c)$ on a differential manifold equipped with time-depending complete Riemannian metric $(g_t)_{t\in [0,T_c)}$, where $\Delta_t$ is the Laplacian induced by $g_t$ and $(Z_t)_{t\in [0,T_c)}$ is a family…

Probability · Mathematics 2017-08-17 Li-Juan Cheng

This paper introduces a novel, non-deterministic method for embedding data in low-dimensional Euclidean space based on computing realizations of a Gaussian process depending on the geometry of the data. This type of embedding first appeared…

Machine Learning · Computer Science 2024-03-14 Anna C. Gilbert , Kevin O'Neill

The development of simple and fast hypergraph spectral methods has been hindered by the lack of numerical algorithms for simulating heat diffusions and computing fundamental objects, such as Personalized PageRank vectors, over hypergraphs.…

Data Structures and Algorithms · Computer Science 2023-07-21 Konstantinos Ameranis , Antares Chen , Adela DePavia , Lorenzo Orecchia , Erasmo Tani

Diffusion models are central to generative modeling and have been adapted to graphs by diffusing adjacency matrix representations. The challenge of having up to $n!$ such representations for graphs with $n$ nodes is only partially mitigated…

This paper integrates manifold learning techniques within a \emph{Gaussian process upper confidence bound} algorithm to optimize an objective function on a manifold. Our approach is motivated by applications where a full representation of…

Machine Learning · Statistics 2023-11-10 Hwanwoo Kim , Daniel Sanz-Alonso , Ruiyi Yang

Dirichlet-to-Neumann maps enable the coupling of multiphysics simulations across computational subdomains by ensuring continuity of state variables and fluxes at artificial interfaces. We present a novel method for learning…

Machine Learning · Computer Science 2026-01-27 Adrienne M. Propp , Jonas A. Actor , Elise Walker , Houman Owhadi , Nathaniel Trask , Daniel M. Tartakovsky

We propose two multiscale comparisons of graphs using heat diffusion, allowing to compare graphs without node correspondence or even with different sizes. These multiscale comparisons lead to the definition of Lipschitz-continuous empirical…

Statistics Theory · Mathematics 2023-05-17 Etienne Lasalle

We consider a diffusion problem on a network on whose nodes we impose Dirichlet and generalized, non-local Kirchhoff-type conditions. We prove well-posedness of the associated initial value problem, and we exploit the theory of…

Analysis of PDEs · Mathematics 2018-12-21 Delio Mugnolo

Existing approaches for diffusion on graphs, e.g., for label propagation, are mainly focused on isotropic diffusion, which is induced by the commonly-used graph Laplacian regularizer. Inspired by the success of diffusivity tensors for…

Computer Vision and Pattern Recognition · Computer Science 2016-02-23 Kwang In Kim , James Tompkin , Hanspeter Pfister , Christian Theobalt

A powerful framework for studying graphs is to consider them as geometric graphs: nodes are randomly sampled from an underlying metric space, and any pair of nodes is connected if their distance is less than a specified neighborhood radius.…

Machine Learning · Computer Science 2022-11-28 Raffaele Paolino , Aleksandar Bojchevski , Stephan Günnemann , Gitta Kutyniok , Ron Levie