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Navigability, an ability to find a logarithmically short path between elements using only local information, is one of the most fascinating properties of real-life networks. However, the exact mechanism responsible for the formation of…

Physics and Society · Physics 2016-07-26 Yury A. Malkov , Alexander Ponomarenko

Modularity maximization has been one of the most widely used approaches in the last decade for discovering community structure in networks of practical interest in biology, computing, social science, statistical mechanics, and more.…

Physics and Society · Physics 2017-11-10 David Mehrle , Amy Strosser , Anthony Harkin

Empirical complex systems must differentially respond to external perturbations and, at the same time, internally distribute information to coordinate their components. While networked backbones help with the latter, they limit the…

Physics and Society · Physics 2025-04-18 Arsham Ghavasieh , Manlio De Domenico

Diverse biological networks exhibit universal features distinguished from those of random networks, calling much attention to their origins and implications. Here we propose a minimal evolution model of Boolean regulatory networks, which…

Molecular Networks · Quantitative Biology 2014-11-26 Deok-Sun Lee

I start by reviewing some basic properties of random graphs. I then consider the role of random walks in complex networks and show how they may be used to explain why so many long tailed distributions are found in real data sets. The key…

Statistical Mechanics · Physics 2012-12-11 T. S. Evans

Transportation and distribution networks are a class of spatial networks that have been of interest in recent years. These networks are often characterized by the presence of complex structures such as central loops paired with peripheral…

Physics and Society · Physics 2023-01-23 Sebastiano Bontorin , Giulia Cencetti , Riccardo Gallotti , Bruno Lepri , Manlio De Domenico

We study the influence that population density and the road network have on each others' growth and evolution. We use a simple model of formation and evolution of city roads which reproduces the most important empirical features of street…

Physics and Society · Physics 2009-08-28 Marc Barthelemy , Alessandro Flammini

A central biological question is how natural organisms are so evolvable (capable of quickly adapting to new environments). A key driver of evolvability is the widespread modularity of biological networks--their organization as functional,…

Populations and Evolution · Quantitative Biology 2015-03-13 Jeff Clune , Jean-Baptiste Mouret , Hod Lipson

We study the evolution of the network properties of a populated network embedded in a genotype space characterised by either a low or a high number of potential links, with particular emphasis on the connectivity and clustering. Evolution…

Statistical Mechanics · Physics 2007-05-23 Paul Anderson , Henrik Jeldtoft Jensen

An important feature of many complex systems, both natural and artificial, is the structure and organization of their interaction networks with interesting properties. Here we present a theory of self-organization by evolutionary adaptation…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Venkat Venkatasubramanian , Santhoji Katare , Priyan R. Patkar , Fangping Mu

The quest to understand structure-function relationships in networks across scientific disciplines has intensified. However, the optimal network architecture remains elusive, particularly for complex information processing. Therefore, we…

Adaptation and Self-Organizing Systems · Physics 2024-03-27 Manish Yadav , Sudeshna Sinha , Merten Stender

The design of efficient transportation networks is an important challenge in many research areas. Among the most promising recent methods, biological routing mimic local rules found in nature. However comparisons with other methods are…

Physics and Society · Physics 2018-03-12 François Queyroi

In this paper, we propose an evolving network model growing fast in units of module, based on the analysis of the evolution characteristics in real complex networks. Each module is a small-world network containing several interconnected…

Physics and Society · Physics 2011-10-11 Zou Zhi-Yun , Liu Peng , Lei Li , Gao Jian-Zhi

The study of network structural controllability focuses on the minimum number of driver nodes needed to control a whole network. Despite intensive studies on this topic, most of them consider static networks only. It is well-known, however,…

Physics and Society · Physics 2021-01-27 Rui Zhang , Xiaomeng Wang , Ming Cheng , Tao Jia

Local network community detection aims to find a single community in a large network, while inspecting only a small part of that network around a given seed node. This is much cheaper than finding all communities in a network. Most methods…

Social and Information Networks · Computer Science 2018-05-02 Twan van Laarhoven

Finding the global minimum in complex networks while avoiding local minima is challenging in many types of networks. We study the dynamics of complex human networks and observed that humans have different methods to avoid local minima than…

Physics and Society · Physics 2023-08-15 Elad Schniderman , Yahav Avraham , Shir Shahal , Hamootal Duadi , Nir Davidson , Moti Fridman

Community structure appears to be an intrinsic property of many complex real-world networks. However, recent work shows that real-world networks reveal even more sophisticated modules than classical cohesive (link-density) communities. In…

Physics and Society · Physics 2012-02-07 Lovro Šubelj , Marko Bajec

Natural selection and random drift are competing phenomena for explaining the evolution of populations. Combining a highly fit mutant with a population structure that improves the odds that the mutant spreads through the whole population…

Populations and Evolution · Quantitative Biology 2009-08-14 Valmir C. Barbosa , Raul Donangelo , Sergio R. Souza

A common trait of complex systems is that they can be represented by means of a network of interacting parts. It is, in fact, the network organisation (more than the parts) what largely conditions most higher-level properties, which are not…

Populations and Evolution · Quantitative Biology 2019-07-15 Ricard Sole , Sergi Valverde

Scale-free and non-computable characteristics of natural networks are found to result from the least-time dispersal of energy. To consider a network as a thermodynamic system is motivated since ultimately everything that exists can be…

General Physics · Physics 2011-06-22 Tuomo Hartonen , Arto Annila