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Motivation: Flow Injection Analysis coupled to High-Resolution Mass Spectrometry (FIA-HRMS) is a promising approach for high-throughput metabolomics. FIA-HRMS data, however, cannot be preprocessed with current software tools which rely on…

Quantitative Methods · Quantitative Biology 2017-08-15 Alexis Delabrière , Ulli Hohenester , Benoit Colsch , Christophe Junot , François Fenaille , Etienne Thévenot

Medical image interpretation is central to most clinical applications such as disease diagnosis, treatment planning, and prognostication. In clinical practice, radiologists examine medical images and manually compile their findings into…

Computer Vision and Pattern Recognition · Computer Science 2023-11-21 Nurbanu Aksoy , Nishant Ravikumar , Alejandro F Frangi

Aim: provide a methodological framework for the process of clinical tests, clinical acceptance, and scientific assessment of algorithms and software based on the artificial intelligence (AI) technologies. Clinical tests are considered as a…

Radiology report generation (RRG) aims to automatically produce diagnostic reports from medical images, with the potential to enhance clinical workflows and reduce radiologists' workload. While recent approaches leveraging multimodal large…

Artificial Intelligence · Computer Science 2025-05-16 Ziruo Yi , Ting Xiao , Mark V. Albert

Multimodal image fusion enables precise lesion localization and characterization for accurate diagnosis, thereby strengthening clinical decision-making and driving its growing prominence in medical imaging research. A powerful multimodal…

Computer Vision and Pattern Recognition · Computer Science 2026-03-26 Jie Song , Jun Jia , Wei Sun , Wangqiu Zhou , Tao Tan , Guangtao Zhai

Sampling useful three-dimensional molecular structures along with their most favorable conformations is a key challenge in drug discovery. Current state-of-the-art 3D de-novo design flow matching or diffusion-based models are limited to…

Machine Learning · Computer Science 2025-11-24 Riccardo Tedoldi , Ola Engkvist , Patrick Bryant , Hossein Azizpour , Jon Paul Janet , Alessandro Tibo

Purpose: The aim of this work is to develop a high-performance, flexible and easy-to-use MRI reconstruction framework using the scientific programming language Julia. Methods: Julia is a modern, general purpose programming language with…

Medical Physics · Physics 2021-03-22 Tobias Knopp , Mirco Grosser

Medical foundation models show promise to learn broadly generalizable features from large, diverse datasets. This could be the base for reliable cross-modality generalization and rapid adaptation to new, task-specific goals, with only a few…

Reliable medical image classification requires accurate predictions and well-calibrated uncertainty estimates, especially in high-stakes clinical settings. This work presents MedSymmFlow, a generative-discriminative hybrid model built on…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Francisco Caetano , Lemar Abdi , Christiaan Viviers , Amaan Valiuddin , Fons van der Sommen

Digital medical informatics and images are commonly used in hospitals today,. Because of the interrelatedness of the radiology department and other departments, especially the intensive care unit and emergency department, the transmission…

Software Engineering · Computer Science 2009-10-13 Ahmad Shukri Mohd Noor , Md Yazid Md Saman

Large-language models (LLMs) are rapidly being applied to radiology, enabling automated image interpretation and report generation tasks. Their deployment in clinical practice requires both high diagnostic accuracy and low inference…

Tissues and Organs · Quantitative Biology 2025-11-11 Jyun-Ping Kao

Stimela2 is a new-generation framework for developing data reduction workflows. It is designed for radio astronomy data but can be adapted for other data processing applications. Stimela2 aims at the middle ground between ease of…

Instrumentation and Methods for Astrophysics · Physics 2024-12-18 Oleg M. Smirnov , Sphesihle Makhathini , Jonathan S. Kenyon , Hertzog L. Bester , Simon J. Perkins , Athanaseus J. T. Ramaila , Benjamin V. Hugo

Medical image re-identification (MedReID) is under-explored so far, despite its critical applications in personalized healthcare and privacy protection. In this paper, we introduce a thorough benchmark and a unified model for this problem.…

Computer Vision and Pattern Recognition · Computer Science 2025-03-12 Yuan Tian , Kaiyuan Ji , Rongzhao Zhang , Yankai Jiang , Chunyi Li , Xiaosong Wang , Guangtao Zhai

Digital medical imaging laboratories contain many distinct types of equipment provided by different manufacturers. Interoperability is a critical issue and the DICOM protocol is a de facto standard in those environments. However,…

Software Engineering · Computer Science 2018-06-27 Jorge Miguel Silva , Tiago Marques Godinho , David Silva , Carlos Costa

The integration of machine learning in medical image analysis can greatly enhance the quality of healthcare provided by physicians. The combination of human expertise and computerized systems can result in improved diagnostic accuracy. An…

Technological advances in artificial intelligence (AI) have enabled the development of large vision language models (LVLMs) that are trained on millions of paired image and text samples. Subsequent research efforts have demonstrated great…

Computation and Language · Computer Science 2024-11-28 Kalina P. Slavkova , Melanie Traughber , Oliver Chen , Robert Bakos , Shayna Goldstein , Dan Harms , Bradley J. Erickson , Khan M. Siddiqui

Intraoperative ultrasound imaging provides real-time guidance during numerous surgical procedures, but its interpretation is complicated by noise, artifacts, and poor alignment with high-resolution preoperative MRI/CT scans. To bridge the…

Computer Vision and Pattern Recognition · Computer Science 2025-08-12 Noe Bertramo , Gabriel Duguey , Vivek Gopalakrishnan

Background and Objective: Nowadays usage paradigms of medical imaging resources are requesting vendor-neutral archives, accessible through standard interfaces, with multi-repository support. Regional repositories shared by distinct…

Software Engineering · Computer Science 2020-06-24 Rui Lebre , Luís Bastião , Carlos Costa

The design of nuclear imaging scanners is crucial for optimizing detection and imaging processes. While advancements have been made in simplistic, symmetrical modalities, current research is progressing towards more intricate structures,…

Medical Physics · Physics 2024-11-21 Anh Le , Amirreza Hashemi , Mark P. Ottensmeyer , Hamid Sabet

Conditional medical image generation plays an important role in many clinically relevant imaging tasks. However, existing methods still face a fundamental challenge in balancing inference efficiency, patient-specific fidelity, and…

Computer Vision and Pattern Recognition · Computer Science 2026-04-22 Zirong Li , Siyuan Mei , Weiwen Wu , Andreas Maier , Lina Gölz , Yan Xia