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Predicting the binding free energy between antibodies and antigens is a key challenge in structure-aware biomolecular modeling, with direct implications for antibody design. Most existing methods either rely solely on sequence embeddings or…

Biomolecules · Quantitative Biology 2025-08-28 Ciyuan Yu , Hongzong Li , Jiahao Ma , Shiqin Tang , Ye-Fan Hu , Jian-Dong Huang

We propose a new defense mechanism against adversarial attacks inspired by an optical co-processor, providing robustness without compromising natural accuracy in both white-box and black-box settings. This hardware co-processor performs a…

Computer Vision and Pattern Recognition · Computer Science 2022-10-03 Alessandro Cappelli , Ruben Ohana , Julien Launay , Laurent Meunier , Iacopo Poli , Florent Krzakala

In the era of 6G, with compelling visions of intelligent transportation systems and digital twins, remote surveillance is poised to become a ubiquitous practice. Substantial data volume and frequent updates present challenges in wireless…

Networking and Internet Architecture · Computer Science 2024-10-23 Wanting Yang , Zehui Xiong , Yanli Yuan , Wenchao Jiang , Tony Q. S. Quek , Merouane Debbah

Adeno-associated viral (AAV) vectors are widely used delivery platforms in gene therapy, and the design of improved capsids is key to expanding their therapeutic potential. A central challenge in AAV bioengineering, as in protein design…

Generative adversarial networks (GANs) are capable of producing high quality image samples. However, unlike variational autoencoders (VAEs), GANs lack encoders that provide the inverse mapping for the generators, i.e., encode images back to…

Machine Learning · Statistics 2018-12-20 Paul K. Rubenstein , Yunpeng Li , Dominik Roblek

We introduce the "adversarial code learning" (ACL) module that improves overall image generation performance to several types of deep models. Instead of performing a posterior distribution modeling in the pixel spaces of generators, ACLs…

Computer Vision and Pattern Recognition · Computer Science 2020-02-03 Jiangbo Yuan , Bing Wu , Wanying Ding , Qing Ping , Zhendong Yu

Multimodal retrieval systems struggle to resolve image-text queries against text-only corpora: the best vision-language encoder achieves only 27.6 nDCG@10 on MM-BRIGHT, underperforming strong text-only retrievers. We argue the bottleneck is…

Generating stable molecular conformations typically forces a tradeoff between the physical realism of energy-based relaxation and the sampling efficiency of data-driven generative models. While machine learning force fields (MLFFs) can…

Generative Adversarial Networks have become one of the most studied frameworks for unsupervised learning due to their intuitive formulation. They have also been shown to be capable of generating convincing examples in limited domains, such…

Machine Learning · Computer Science 2016-12-14 Daniel Jiwoong Im , He Ma , Chris Dongjoo Kim , Graham Taylor

The success of foundation AI has motivated the research of circuit foundation models, which are customized to assist the integrated circuit (IC) design process. However, existing pre-trained circuit foundation models are typically limited…

Machine Learning · Computer Science 2025-08-07 Wenji Fang , Jing Wang , Yao Lu , Shang Liu , Zhiyao Xie

Anomaly generation is an effective way to mitigate data scarcity for anomaly detection task. Most existing works shine at industrial anomaly generation with multiple specialists or large generative models, rarely generalizing to anomalies…

Computer Vision and Pattern Recognition · Computer Science 2025-04-08 Ying Zhao

It remains a challenging task to generate a vast variety of novel compounds with desirable pharmacological properties. In this work, a generative network complex (GNC) is proposed as a new platform for designing novel compounds, predicting…

Biomolecules · Quantitative Biology 2019-11-01 Christopher Grow , Kaifu Gao , Duc Duy Nguyen , Guo-Wei Wei

Adversarial defenses protect machine learning models from adversarial attacks, but are often tailored to one type of model or attack. The lack of information on unknown potential attacks makes detecting adversarial examples challenging.…

Machine Learning · Computer Science 2023-09-15 Xinglong Chang , Katharina Dost , Kaiqi Zhao , Ambra Demontis , Fabio Roli , Gill Dobbie , Jörg Wicker

Training a universal controller for robots with different morphologies is a promising research trend, since it can significantly enhance the robustness and resilience of the robotic system. However, diverse morphologies can yield different…

Robotics · Computer Science 2025-05-22 Yingbo Luo , Meibao Yao , Xueming Xiao

Metagenomic disease prediction commonly relies on species abundance tables derived from large, incomplete reference catalogs, constraining resolution and discarding valuable information contained in DNA reads. To overcome these limitations,…

Genomics · Quantitative Biology 2026-01-08 Gaspar Roy , Eugeni Belda , Baptiste Hennecart , Yann Chevaleyre , Edi Prifti , Jean-Daniel Zucker

Recent advances in brain-computer interface (BCI) technology, particularly based on generative adversarial networks (GAN), have shown great promise for improving decoding performance for BCI. Within the realm of Brain-Computer Interfaces…

Audio and Speech Processing · Electrical Eng. & Systems 2023-12-01 Young-Eun Lee , Seo-Hyun Lee , Soowon Kim , Jung-Sun Lee , Deok-Seon Kim , Seong-Whan Lee

Current state-of-the-art systems for sequence labeling are typically based on the family of Recurrent Neural Networks (RNNs). However, the shallow connections between consecutive hidden states of RNNs and insufficient modeling of global…

Computation and Language · Computer Science 2019-06-07 Yijin Liu , Fandong Meng , Jinchao Zhang , Jinan Xu , Yufeng Chen , Jie Zhou

Generative Adversarial Networks (GANs) have experienced a recent surge in popularity, performing competitively in a variety of tasks, especially in computer vision. However, GAN training has shown limited success in natural language…

Computation and Language · Computer Science 2019-01-03 David Donahue , Anna Rumshisky

Recent years have witnessed the breakthrough success of deep convolutional neural networks (DCNNs) in image classification and other vision applications. Although freeing users from the troublesome handcrafted feature extraction by…

Computer Vision and Pattern Recognition · Computer Science 2018-07-03 Benteng Ma , Yong Xia

Graph neural networks (GNNs) face significant challenges with class imbalance, leading to biased inference results. To address this issue in heterogeneous graphs, we propose a novel framework that combines Graph Neural Network (GNN) and…

Machine Learning · Computer Science 2024-11-26 Hung-Chun Hsu , Bo-Jun Wu , Ming-Yi Hong , Che Lin , Chih-Yu Wang