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Thanks to the rapid development of diffusion models, unprecedented progress has been witnessed in image synthesis. Prior works mostly rely on pre-trained linguistic models, but a text is often too abstract to properly specify all the…

Computer Vision and Pattern Recognition · Computer Science 2023-08-15 Binbin Yang , Yi Luo , Ziliang Chen , Guangrun Wang , Xiaodan Liang , Liang Lin

Source localization in graph information propagation is essential for mitigating network disruptions, including misinformation spread, cyber threats, and infrastructure failures. Existing deep generative approaches face significant…

Social and Information Networks · Computer Science 2025-09-24 Hongyi Chen , Jingtao Ding , Xiaojun Liang , Yong Li , Xiao-Ping Zhang

Developing reliable and generalizable deep learning systems for medical imaging faces significant obstacles due to spurious correlations, data imbalances, and limited text annotations in datasets. Addressing these challenges requires…

Computer Vision and Pattern Recognition · Computer Science 2025-07-23 Amar Kumar , Anita Kriz , Mohammad Havaei , Tal Arbel

Graph neural networks (GNNs), especially dynamic GNNs, have become a research hotspot in spatio-temporal forecasting problems. While many dynamic graph construction methods have been developed, relatively few of them explore the causal…

Machine Learning · Computer Science 2023-05-18 Guojun Liang , Prayag Tiwari , Sławomir Nowaczyk , Stefan Byttner , Fernando Alonso-Fernandez

Recent years have witnessed remarkable progress in multimodal learning within computational pathology. Existing models primarily rely on vision and language modalities; however, language alone lacks molecular specificity and offers limited…

Computer Vision and Pattern Recognition · Computer Science 2026-02-17 Minghao Han , Dingkang Yang , Linhao Qu , Zizhi Chen , Gang Li , Han Wang , Jiacong Wang , Lihua Zhang

Recent years have seen a rapid expansion of the model space explored in statistical phylogenetics, emphasizing the need for new approaches to statistical model representation and software development. Clear communication and representation…

Populations and Evolution · Quantitative Biology 2013-12-10 Sebastian Höhna , Tracy A. Heath , Bastien Boussau , Michael J. Landis , Fredrik Ronquist , John P. Huelsenbeck

Recent advances in image generation have made diffusion models powerful tools for creating high-quality images. However, their iterative denoising process makes understanding and interpreting their semantic latent spaces more challenging…

Computation and Language · Computer Science 2024-11-06 E. Zhixuan Zeng , Yuhao Chen , Alexander Wong

Recent advances in image editing leverage latent diffusion models (LDMs) for versatile, text-prompt-driven edits across diverse tasks. Yet, maintaining pixel-level edge structures-crucial for tasks such as photorealistic style transfer or…

Computer Vision and Pattern Recognition · Computer Science 2026-01-26 Minsu Gong , Nuri Ryu , Jungseul Ok , Sunghyun Cho

In this work, we present FRIGID, a framework with a novel diffusion language model that generates molecular structures conditioned on mass spectra via intermediate fingerprint representations and determined chemical formulae, training at…

We introduce a novel method for conditioning diffusion-based image synthesis models with heterogeneous graph data. Existing approaches typically incorporate conditioning variables directly into model architectures, either through…

Computer Vision and Pattern Recognition · Computer Science 2025-02-04 Rupert Menneer , Christos Margadji , Sebastian W. Pattinson

Traffic forecasting, a crucial application of spatio-temporal graph (STG) learning, has traditionally relied on deterministic models for accurate point estimations. Yet, these models fall short of quantifying future uncertainties. Recently,…

Machine Learning · Computer Science 2024-08-08 Lequan Lin , Dai Shi , Andi Han , Junbin Gao

Generative models are popular for medical imaging tasks such as anomaly detection, feature extraction, data visualization, or image generation. Since they are parameterized by deep learning models, they are often sensitive to distribution…

Machine Learning · Computer Science 2025-03-25 Miguel López-Pérez , Marco Miani , Valery Naranjo , Søren Hauberg , Aasa Feragen

Spatial transcriptomics (ST) reveals spatial heterogeneity of gene expression, yet its resolution is limited by current platforms. Recent methods enhance resolution via H&E-stained histology, but three major challenges persist: (1)…

Image and Video Processing · Electrical Eng. & Systems 2025-08-12 Xuepeng Liu , Zheng Jiang , Pinan Zhu , Hanyu Liu , Chao Li

Spatiotemporal data analysis is pivotal across various domains, such as transportation, meteorology, and healthcare. The data collected in real-world scenarios are often incomplete due to device malfunctions and network errors.…

Machine Learning · Computer Science 2024-03-25 Yakun Chen , Kaize Shi , Zhangkai Wu , Juan Chen , Xianzhi Wang , Julian McAuley , Guandong Xu , Shui Yu

Diffusion models and flow matching have demonstrated remarkable success in text-to-image generation. While many existing alignment methods primarily focus on fine-tuning pre-trained generative models to maximize a given reward function,…

Machine Learning · Statistics 2026-02-03 Yidong Ouyang , Liyan Xie , Hongyuan Zha , Guang Cheng

Multicellular organisms exhibit a high degree of structural organization with specific cell types always occurring in characteristic locations. The conventional framework for describing the emergence of such consistent spatial patterns is…

Tissues and Organs · Quantitative Biology 2022-05-11 Chandrashekar Kuyyamudi , Shakti N. Menon , Sitabhra Sinha

Foundation models have exhibited unprecedented capabilities in tackling many domains and tasks. Models such as CLIP are currently widely used to bridge cross-modal representations, and text-to-image diffusion models are arguably the leading…

Computer Vision and Pattern Recognition · Computer Science 2025-11-19 Barbara Toniella Corradini , Mustafa Shukor , Paul Couairon , Guillaume Couairon , Franco Scarselli , Matthieu Cord

Graph foundation models (GFMs) seek transferable representations across graph domains but are limited by structural heterogeneity and incompatible node feature spaces. We propose Structure-Centric Graph Foundation Models (SCGFM), which…

Machine Learning · Computer Science 2026-05-12 Xiaodong He , Haolan He , Ruiyi Fang , Ming Sun , Zhao Kang

Unsupervised Graph Domain Adaptation (UGDA) leverages labeled source domain graphs to achieve effective performance in unlabeled target domains despite distribution shifts. However, existing methods often yield suboptimal results due to the…

Machine Learning · Computer Science 2025-07-11 Junyu Luo , Yuhao Tang , Yiwei Fu , Xiao Luo , Zhizhuo Kou , Zhiping Xiao , Wei Ju , Wentao Zhang , Ming Zhang

In the field of behavior-related brain computation, it is necessary to align raw neural signals against the drastic domain shift among them. A foundational framework within neuroscience research posits that trial-based neural population…

Neurons and Cognition · Quantitative Biology 2024-03-12 Yule Wang , Zijing Wu , Chengrui Li , Anqi Wu
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