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Although bulk transcriptomic analyses have significantly contributed to an enhanced comprehension of multifaceted diseases, their exploration capacity is impeded by the heterogeneous compositions of biological samples. Indeed, by averaging…

Quantitative Methods · Quantitative Biology 2023-10-24 Bastien Chassagnol , Grégory Nuel , Etienne Becht

The stability of spike deconvolution, which aims at recovering point sources from their convolution with a point spread function (PSF), is known to be related to the separation between those sources. When the observations are noisy, it is…

Information Theory · Computer Science 2021-10-15 Maxime Ferreira Da Costa , Yuejie Chi

In ultrasound imaging the appearance of homogeneous regions of tissue is subject to speckle, which for certain applications can make the detection of tissue irregularities difficult. To cope with this, it is common practice to apply speckle…

Image and Video Processing · Electrical Eng. & Systems 2022-08-02 Rüdiger Göbl , Christoph Hennersperger , Nassir Navab

Denoising by frame thresholding is one of the most basic and efficient methods for recovering a discrete signal or image from data that are corrupted by additive Gaussian white noise. The basic idea is to select a frame of analyzing…

Numerical Analysis · Mathematics 2015-01-21 Markus Haltmeier , Axel Munk

Spectral-spatial processing has been increasingly explored in remote sensing hyperspectral image classification. While extensive studies have focused on developing methods to improve the classification accuracy, experimental setting and…

Computer Vision and Pattern Recognition · Computer Science 2017-03-08 Jie Liang , Jun Zhou , Yuntao Qian , Lian Wen , Xiao Bai , Yongsheng Gao

Advances in modern technology have enabled the simultaneous recording of neural spiking activity, which statistically can be represented by a multivariate point process. We characterise the second order structure of this process via the…

Methodology · Statistics 2024-04-30 Carla Pinkney , Carolina Euan , Alex Gibberd , Ali Shojaie

In this paper we analyze the blind deconvolution of an image and an unknown blur in a coded imaging system. The measurements consist of subsampled convolution of an unknown blurring kernel with multiple random binary modulations (coded…

Information Theory · Computer Science 2015-10-27 Sohail Bahmani , Justin Romberg

Bayesian methods have been very successful in quantifying uncertainty in physics-based problems in parameter estimation and prediction. In these cases, physical measurements y are modeled as the best fit of a physics-based model…

Data Analysis, Statistics and Probability · Physics 2015-02-06 Dave Higdon , Jordan D. McDonnell , Nicolas Schunck , Jason Sarich , Stefan M. Wild

In this paper, we propose a very deep fully convolutional encoding-decoding framework for image restoration such as denoising and super-resolution. The network is composed of multiple layers of convolution and de-convolution operators,…

Computer Vision and Pattern Recognition · Computer Science 2016-09-02 Xiao-Jiao Mao , Chunhua Shen , Yu-Bin Yang

Integrating heterogeneous datasets across different measurement platforms is a fundamental challenge in many scientific applications. A common example arises in deconvolution problems, such as cell type deconvolution, where one aims to…

Methodology · Statistics 2025-09-30 Dongyue Xie , Lin Gui , Jingshu Wang

Interpretability is crucial for machine learning in many scenarios such as quantitative finance, banking, healthcare, etc. Symbolic regression (SR) is a classic interpretable machine learning method by bridging X and Y using mathematical…

Methodology · Statistics 2020-01-17 Ying Jin , Weilin Fu , Jian Kang , Jiadong Guo , Jian Guo

M\"ossbauer spectroscopy, which provides knowledge related to electronic states in materials, has been applied to various fields such as condensed matter physics and material sciences. In conventional spectral analyses based on least-square…

Computational Physics · Physics 2022-05-20 Ryota Moriguchi , Satoshi Tsutsui , Shun Katakami , Kenji Nagata , Masaichiro Mizumaki , Masato Okada

Across diverse biological systems -- ranging from neural networks to intracellular signaling and genetic regulatory networks -- the information about changes in the environment is frequently encoded in the full temporal dynamics of the…

Quantitative Methods · Quantitative Biology 2020-07-01 Sarah A Cepeda-Humerez , Jakob Ruess , Gašper Tkačik

The direct detection of exoplanets with high-contrast instruments can be boosted with high spectral resolution. For integral field spectrographs yielding hyperspectral data, this means that the field of view consists of diffracted starlight…

Instrumentation and Methods for Astrophysics · Physics 2021-06-09 Julien Rameau , Jocelyn Chanussot , Alexis Carlotti , Mickael Bonnefoy , Philippe Delorme

Neural recordings, returns from radars and sonars, images in astronomy and single-molecule microscopy can be modeled as a linear superposition of a small number of scaled and delayed copies of a band-limited or diffraction-limited point…

Information Theory · Computer Science 2016-05-25 Yuejie Chi

Imaging and hyperspectral data analysis is central to progress across biology, medicine, chemistry, and physics. The core challenge lies in converting high-resolution or high-dimensional datasets into interpretable representations that…

Image and Video Processing · Electrical Eng. & Systems 2025-12-29 Kamyar Barakati , Yu Liu , Utkarsh Pratiush , Boris N. Slautin , Sergei V. Kalinin

Bayesian reasoning is a powerful mechanism for probabilistic inference in smart edge-devices. During such inferences, a low-precision arithmetic representation can enable improved energy efficiency. However, its impact on inference accuracy…

Hardware Architecture · Computer Science 2021-03-02 Nimish Shah , Laura I. Galindez Olascoaga , Wannes Meert , Marian Verhelst

Least squares deconvolution (LSD) is a powerful method of extracting high-precision average line profiles from the stellar intensity and polarization spectra. Despite its common usage, the LSD method is poorly documented and has never been…

Solar and Stellar Astrophysics · Physics 2015-05-19 O. Kochukhov , V. Makaganiuk , N. Piskunov

Compositional explanations are a family of methods that aim to describe the spatial alignment between neurons' receptive field activations and concepts through logical rules, typically computed via a search over all possible concept…

Artificial Intelligence · Computer Science 2026-05-28 Biagio La Rosa , Leilani H. Gilpin

The robustness of Transformer-based Natural Language Inference encoders is frequently compromised as they tend to rely more on dataset biases than on the intended task-relevant features. Recent studies have attempted to mitigate this by…

Computation and Language · Computer Science 2024-04-23 Jianxiang Zang , Hui Liu
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