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Model-based deep learning (MBDL) is a powerful methodology for designing deep models to solve imaging inverse problems. MBDL networks can be seen as iterative algorithms that estimate the desired image using a physical measurement model and…

Image and Video Processing · Electrical Eng. & Systems 2025-04-04 Chicago Y. Park , Weijie Gan , Zihao Zou , Yuyang Hu , Zhixin Sun , Ulugbek S. Kamilov

High resolution magnetic resonance~(MR) imaging~(MRI) is desirable in many clinical applications, however, there is a trade-off between resolution, speed of acquisition, and noise. It is common for MR images to have worse through-plane…

Image and Video Processing · Electrical Eng. & Systems 2018-02-27 Can Zhao , Aaron Carass , Blake E. Dewey , Jerry L. Prince

In this paper, we focus on three problems in deep learning based medical image segmentation. Firstly, U-net, as a popular model for medical image segmentation, is difficult to train when convolutional layers increase even though a deeper…

Computer Vision and Pattern Recognition · Computer Science 2018-10-17 Wanli Chen , Yue Zhang , Junjun He , Yu Qiao , Yifan Chen , Hongjian Shi , Xiaoying Tang

High-resolution medical images are beneficial for analysis but their acquisition may not always be feasible. Alternatively, high-resolution images can be created from low-resolution acquisitions using conventional upsampling methods, but…

Image and Video Processing · Electrical Eng. & Systems 2022-03-01 Jörg Sander , Bob D. de Vos , Ivana Išgum

In recent years Deep Learning has brought about a breakthrough in Medical Image Segmentation. U-Net is the most prominent deep network in this regard, which has been the most popular architecture in the medical imaging community. Despite…

Computer Vision and Pattern Recognition · Computer Science 2019-09-17 Nabil Ibtehaz , M. Sohel Rahman

Intraoral scans are widely used in digital dentistry for tasks such as dental restoration, treatment planning, and orthodontic procedures. These scans contain detailed topological information, but manual annotation of these scans remains a…

Computer Vision and Pattern Recognition · Computer Science 2025-02-28 Daron Weekley , Jace Duckworth , Anastasiia Sukhanova , Ananya Jana

The main focus of this work is a novel framework for the joint reconstruction and segmentation of parallel MRI (PMRI) brain data. We introduce an image domain deep network for calibrationless recovery of undersampled PMRI data. The proposed…

Image and Video Processing · Electrical Eng. & Systems 2021-02-03 Aniket Pramanik , Mathews Jacob

Image reconstruction from undersampled k-space data has been playing an important role for fast MRI. Recently, deep learning has demonstrated tremendous success in various fields and also shown potential to significantly speed up MR…

Image and Video Processing · Electrical Eng. & Systems 2019-07-30 Dong Liang , Jing Cheng , Ziwen Ke , Leslie Ying

Compressed Sensing MRI reconstructs images of the body's internal anatomy from undersampled measurements, thereby reducing scan time. Recently, deep learning has shown great potential for reconstructing high-fidelity images from highly…

Image and Video Processing · Electrical Eng. & Systems 2025-04-07 Armeet Singh Jatyani , Jiayun Wang , Aditi Chandrashekar , Zihui Wu , Miguel Liu-Schiaffini , Bahareh Tolooshams , Anima Anandkumar

Objective: To improve accelerated MRI reconstruction through a densely connected cascading deep learning reconstruction framework. Materials and Methods: A cascading deep learning reconstruction framework (baseline model) was modified by…

Image and Video Processing · Electrical Eng. & Systems 2023-05-23 Jon Andre Ottesen , Matthan W. A. Caan , Inge Rasmus Groote , Atle Bjørnerud

This report provides an overview of the current state of the art deep learning architectures and optimisation techniques, and uses the ADNI hippocampus MRI dataset as an example to compare the effectiveness and efficiency of different…

Machine Learning · Computer Science 2015-05-11 Matthew Lai

Deep Learning for neuroimaging data is a promising but challenging direction. The high dimensionality of 3D MRI scans makes this endeavor compute and data-intensive. Most conventional 3D neuroimaging methods use 3D-CNN-based architectures…

Image and Video Processing · Electrical Eng. & Systems 2021-02-10 Umang Gupta , Pradeep K. Lam , Greg Ver Steeg , Paul M. Thompson

A novel deep learning architecture (XmasNet) based on convolutional neural networks was developed for the classification of prostate cancer lesions, using the 3D multiparametric MRI data provided by the PROSTATEx challenge. End-to-end…

Computer Vision and Pattern Recognition · Computer Science 2017-03-14 Saifeng Liu , Huaixiu Zheng , Yesu Feng , Wei Li

Prostate cancer was the third most common cancer in 2020 internationally, coming after breast cancer and lung cancer. Furthermore, in recent years prostate cancer has shown an increasing trend. According to clinical experience, if this…

Image and Video Processing · Electrical Eng. & Systems 2022-08-30 Carlos Nácher Collado

Magnetic resonance imaging (MRI) provides high spatial resolution and excellent soft-tissue contrast without using harmful ionising radiation. Dynamic MRI is an essential tool for interventions to visualise movements or changes of the…

Medical Physics · Physics 2022-02-14 Soumick Chatterjee , Chompunuch Sarasaen , Georg Rose , Andreas Nürnberger , Oliver Speck

Magnetic Resonance Imaging (MRI) scans are time consuming and precarious, since the patients remain still in a confined space for extended periods of time. To reduce scanning time, some experts have experimented with undersampled k spaces,…

Image and Video Processing · Electrical Eng. & Systems 2022-08-25 Kyler Larsen , Arghya Pal , Yogesh Rathi

Accelerating Magnetic Resonance Imaging (MRI) reduces scan time but often degrades image quality. While Implicit Neural Representations (INRs) show promise for MRI reconstruction, they struggle at high acceleration factors due to weak prior…

Computer Vision and Pattern Recognition · Computer Science 2025-08-12 Ziad Al-Haj Hemidi , Eytan Kats , Mattias P. Heinrich

Buildings' segmentation is a fundamental task in the field of earth observation and aerial imagery analysis. Most existing deep learning-based methods in the literature can be applied to a fixed or narrow-range spatial resolution imagery.…

Computer Vision and Pattern Recognition · Computer Science 2023-10-04 Hasan Nasrallah , Mustafa Shukor , Ali J. Ghandour

Motivation: Spliced alignment refers to the alignment of messenger RNA (mRNA) or protein sequences to eukaryotic genomes. It plays a critical role in gene annotation and the study of gene functions. Accurate spliced alignment demands…

Genomics · Quantitative Biology 2025-09-23 Siying Yang , Neng Huang , Heng Li

Deep Learning (DL) methods can reconstruct highly accelerated magnetic resonance imaging (MRI) scans, but they rely on application-specific large training datasets and often generalize poorly to out-of-distribution data. Self-supervised…

Image and Video Processing · Electrical Eng. & Systems 2026-04-24 Hongze Yu , Jeffrey A. Fessler , Yun Jiang