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Dynamic graphs are rife with higher-order interactions, such as co-authorship relationships and protein-protein interactions in biological networks, that naturally arise between more than two nodes at once. In spite of the ubiquitous…

Machine Learning · Computer Science 2021-02-09 Manohar Kaul , Masaaki Imaizumi

We recently introduced a formalism for the modeling of temporal networks, that we call stream graphs. It emphasizes the streaming nature of data and allows rigorous definitions of many important concepts generalizing classical graphs. This…

Social and Information Networks · Computer Science 2021-11-24 Matthieu Latapy , Clémence Magnien , Tiphaine Viard

Directed and heterogeneous hypergraphs capture directional higher-order interactions with intrinsically asymmetric functional dependencies among nodes. As a result, damage to certain nodes can suppress entire hyperedges, whereas failure of…

Disordered Systems and Neural Networks · Physics 2026-01-29 Yunxue Sun , Xueming Liu , Ginestra Bianconi

Compound graphs are networks in which vertices can be grouped into larger subsets, with these subsets capable of further grouping, resulting in a nesting that can be many levels deep. In several applications, including biological workflows,…

Human-Computer Interaction · Computer Science 2024-08-09 Chang Han , Justin Lieffers , Clayton Morrison , Katherine E. Isaacs

Complex networks are universal, arising in fields as disparate as sociology, physics, and biology. In the past decade, extensive research into the properties and behaviors of complex systems has uncovered surprising commonalities among the…

Other Quantitative Biology · Quantitative Biology 2015-06-26 Claire Christensen , Reka Albert

Recent evidence indicates that the abundance of recurring elementary interaction patterns in complex networks, often called subgraphs or motifs, carry significant information about their function and overall organization. Yet, the…

Disordered Systems and Neural Networks · Physics 2009-11-10 A. Vazquez , R. Dobrin , D. Sergi , J. -P. Eckmann , Z. N. Oltvai , A. -L. Barabasi

Multiplex networks are complex graph structures in which a set of entities are connected to each other via multiple types of relations, each relation representing a distinct layer. Such graphs are used to investigate many complex…

We consider spectral methods that uncover hidden structures in directed networks. We establish and exploit connections between node reordering via (a) minimizing an objective function and (b) maximizing the likelihood of a random graph…

Social and Information Networks · Computer Science 2021-10-12 Xue Gong , Desmond John Higham , Konstantinos Zygalakis

Contagion processes have been proven to fundamentally depend on the structural properties of the interaction networks conveying them. Many real networked systems are characterized by clustered substructures representing either collections…

Physics and Society · Physics 2021-06-01 Giulio Burgio , Alex Arenas , Sergio Gómez , Joan T. Matamalas

Network science has evolved into an indispensable platform for studying complex systems. But recent research has identified limits of classical networks, where links connect pairs of nodes, to comprehensively describe group interactions.…

Physics and Society · Physics 2022-03-24 Soumen Majhi , Matjaz Perc , Dibakar Ghosh

Directed graphs are widely used in modelling of nonsymmetric relations in various sciences and engineering disciplines. We discuss invariants of strongly connected directed graphs - minimal number of vertices or edges necessary to remove to…

Discrete Mathematics · Computer Science 2016-10-21 Peteris Daugulis

Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

Signal Processing · Electrical Eng. & Systems 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami

The feed-forward relationship naturally observed in time-dependent processes and in a diverse number of real systems -such as some food-webs and electronic and neural wiring- can be described in terms of so-called directed acyclic graphs…

Physics and Society · Physics 2015-05-19 Joaquín Goñi , Bernat Corominas-Murtra , Ricard V. Solé , Carlos Rodríguez-Caso

Encoding brain regions and their connections as a network of nodes and edges captures many of the possible paths along which information can be transmitted as humans process and perform complex behaviors. Because cognitive processes involve…

Neurons and Cognition · Quantitative Biology 2016-12-21 Ann Sizemore , Chad Giusti , Ari Kahn , Richard F. Betzel , Danielle S. Bassett

Many real-world complex networks actually have a bipartite nature: their nodes may be separated into two classes, the links being between nodes of different classes only. Despite this, and despite the fact that many ad-hoc tools have been…

Statistical Mechanics · Physics 2007-05-23 Matthieu Latapy , Clemence Magnien , Nathalie Del Vecchio

The connections in many networks are not merely binary entities, either present or not, but have associated weights that record their strengths relative to one another. Recent studies of networks have, by and large, steered clear of such…

Statistical Mechanics · Physics 2009-11-10 M. E. J. Newman

Higher-order networks have emerged as a powerful framework to model complex systems and their collective behavior. Going beyond pairwise interactions, they encode structured relations among arbitrary numbers of units through representations…

Adaptation and Self-Organizing Systems · Physics 2023-03-24 Yuanzhao Zhang , Maxime Lucas , Federico Battiston

The discovery of small world and scale free properties of many real world networks has revolutionized the way we study, analyze, model and process networks. An important way to analyze these complex networks is to visualize them using graph…

Social and Information Networks · Computer Science 2023-04-05 Faraz Zaidi

Modern communication networks are inherently complex in nature. First of all, they have a large number of heterogeneous components. Secondly, their connectivity is extremely dynamic. Nodes can come and go, links can be removed and added…

Social and Information Networks · Computer Science 2017-08-08 Bisma S. Khan , Muaz A. Niazi

A directed hypergraph, which consists of nodes and hyperarcs, is a higher-order data structure that naturally models directional group interactions (e.g., chemical reactions of molecules). Although there have been extensive studies on local…

Data Structures and Algorithms · Computer Science 2023-11-27 Heechan Moon , Hyunju Kim , Sunwoo Kim , Kijung Shin