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Spatial transcriptomics (ST) provides high-resolution pathological images and whole-transcriptomic expression profiles at individual spots across whole-slide scales. This setting makes it an ideal data source to develop multimodal…

Computer Vision and Pattern Recognition · Computer Science 2024-11-27 Yuxiang Lin , Ling Luo , Ying Chen , Xushi Zhang , Zihui Wang , Wenxian Yang , Mengsha Tong , Rongshan Yu

Electronic health records (EHRs) recorded in hospital settings typically contain a wide range of numeric time series data that is characterized by high sparsity and irregular observations. Effective modelling for such data must exploit its…

Domain adaptation for semantic segmentation enables to alleviate the need for large-scale pixel-wise annotations. Recently, self-supervised learning (SSL) with a combination of image-to-image translation shows great effectiveness in…

Computer Vision and Pattern Recognition · Computer Science 2021-08-16 Yiting Cheng , Fangyun Wei , Jianmin Bao , Dong Chen , Fang Wen , Wenqiang Zhang

In the arena of language model fine-tuning, the traditional approaches, such as Domain-Adaptive Pretraining (DAPT) and Task-Adaptive Pretraining (TAPT), although effective, but computational intensive. This research introduces a novel…

Computation and Language · Computer Science 2024-05-10 Keyu Chen , Yuan Pang , Zi Yang

Spatial transcriptomics (ST) has emerged as a powerful technology for bridging histology imaging with gene expression profiling. However, its application has been limited by low throughput and the need for specialized experimental…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Tinglin Huang , Tianyu Liu , Mehrtash Babadi , Wengong Jin , Rex Ying

Domain shift is a major problem for deploying deep networks in clinical practice. Network performance drops significantly with (target) images obtained differently than its (source) training data. Due to a lack of target label data, most…

Computer Vision and Pattern Recognition · Computer Science 2020-07-08 Yufan He , Aaron Carass , Lianrui Zuo , Blake E. Dewey , Jerry L. Prince

Knowing the similarity between sets of data has a number of positive implications in training an effective model, such as assisting an informed selection out of known datasets favorable to model transfer or data augmentation problems with…

Machine Learning · Computer Science 2020-01-15 Inseok Hwang , Jinho Lee , Frank Liu , Minsik Cho

Current directed graph embedding methods build upon undirected techniques but often inadequately capture directed edge information, leading to challenges such as: (1) Suboptimal representations for nodes with low in/out-degrees, due to the…

Machine Learning · Computer Science 2024-07-22 Zhaoru Ke , Hang Yu , Jianguo Li , Haipeng Zhang

Recent advances in Vision Transformers (ViT) and Stable Diffusion (SD) models with their ability to capture rich semantic features of the image have been used for image correspondence tasks on natural images. In this paper, we examine the…

This report discusses three submissions based on the Duet architecture to the Deep Learning track at TREC 2019. For the document retrieval task, we adapt the Duet model to ingest a "multiple field" view of documents---we refer to the new…

Information Retrieval · Computer Science 2019-12-11 Bhaskar Mitra , Nick Craswell

Speculative decoding is an effective and lossless approach for accelerating LLM inference. However, existing widely adopted model-based draft designs, such as EAGLE3, improve accuracy at the cost of multi-step autoregressive inference,…

Computation and Language · Computer Science 2026-01-28 Fuliang Liu , Xue Li , Ketai Zhao , Yinxi Gao , Ziyan Zhou , Zhonghui Zhang , Zhibin Wang , Wanchun Dou , Sheng Zhong , Chen Tian

Longitudinal imaging is able to capture both static anatomical structures and dynamic changes in disease progression toward earlier and better patient-specific pathology management. However, conventional approaches rarely take advantage of…

Semi-supervised domain adaptation (SSDA) aims to solve tasks in target domain by utilizing transferable information learned from the available source domain and a few labeled target data. However, source data is not always accessible in…

Computer Vision and Pattern Recognition · Computer Science 2021-07-21 Xiaodong Wang , Junbao Zhuo , Shuhao Cui , Shuhui Wang

Accurate prediction of Drug-Target Affinity (DTA) is of vital importance in early-stage drug discovery, facilitating the identification of drugs that can effectively interact with specific targets and regulate their activities. While wet…

Biomolecules · Quantitative Biology 2023-10-18 Qizhi Pei , Lijun Wu , Jinhua Zhu , Yingce Xia , Shufang Xie , Tao Qin , Haiguang Liu , Tie-Yan Liu , Rui Yan

Visual domain adaptation (DA) seeks to transfer trained models to unseen, unlabeled domains across distribution shift, but approaches typically focus on adapting convolutional neural network architectures initialized with supervised…

Computer Vision and Pattern Recognition · Computer Science 2022-06-17 Viraj Prabhu , Sriram Yenamandra , Aaditya Singh , Judy Hoffman

Spatial transcriptomics (ST) is essential for understanding diseases and developing novel treatments. It measures gene expression of each fine-grained area (i.e., different windows) in the tissue slide with low throughput. This paper…

Computer Vision and Pattern Recognition · Computer Science 2022-11-01 Yan Yang , Md Zakir Hossain , Eric A Stone , Shafin Rahman

Rectified Flow (RF) models have advanced high-quality image and video synthesis via optimal transport theory. However, when applied to image-to-image translation, they still depend on costly multi-step denoising, hindering real-time…

Computer Vision and Pattern Recognition · Computer Science 2025-11-26 Shengqian Li , Ming Gao , Yi Liu , Zuzeng Lin , Feng Wang , Feng Dai

In this paper, we efficiently transfer the surpassing representation power of the vision foundation models, such as ViT and Swin, for video understanding with only a few trainable parameters. Previous adaptation methods have simultaneously…

Computer Vision and Pattern Recognition · Computer Science 2023-03-20 Jungin Park , Jiyoung Lee , Kwanghoon Sohn

In this paper, we tackle an open research question in transfer learning, which is selecting a model initialization to achieve high performance on a new task, given several pre-trained models. We propose a new highly efficient and accurate…

Computer Vision and Pattern Recognition · Computer Science 2020-08-06 Kshitij Dwivedi , Jiahui Huang , Radoslaw Martin Cichy , Gemma Roig

Aiming towards human-level generalization, there is a need to explore adaptable representation learning methods with greater transferability. Most existing approaches independently address task-transferability and cross-domain adaptation,…

Computer Vision and Pattern Recognition · Computer Science 2019-09-17 Jogendra Nath Kundu , Nishank Lakkakula , R. Venkatesh Babu
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