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Contemporary neuroscience has embraced network science to study the complex and self-organized structure of the human brain; one of the main outstanding issues is that of inferring from measure data, chiefly functional Magnetic Resonance…

Optimization and Control · Mathematics 2017-03-31 Giulia Prando , Mattia Zorzi , Alessandra Bertoldo , Alessandro Chiuso

Recently, the potential of dynamic brain networks as a neuroimaging biomarkers for mental illnesses is being increasingly recognized. However, there are several unmet challenges in developing such biomarkers, including the need for methods…

Neurons and Cognition · Quantitative Biology 2019-10-10 Suprateek Kundu , Jin Ming , Jennifer Stevens

Effective connectivity analysis provides an understanding of the functional organization of the brain by studying how activated regions influence one other. We propose a nonparametric Bayesian approach to model effective connectivity…

Applications · Statistics 2011-07-22 Sourabh Bhattacharya , Ranjan Maitra

The study presents an exploratory graphical modeling approach for evaluating local item dependency within cognitively diagnostic classification models (DCMs). Current approaches to modeling local dependence require known item structure and…

Methodology · Statistics 2023-05-29 Hyeon-Ah Kang , Jingchen Liu , Zhiliang Ying

We propose a geometric model-free causality measurebased on multivariate delay embedding that can efficiently detect linear and nonlinear causal interactions between time series with no prior information. We then exploit the proposed causal…

Neural and Evolutionary Computing · Computer Science 2016-07-26 Saba Emrani , Hamid Krim

Identification of the causal relationship between multivariate time series is a ubiquitous problem in data science. Granger causality measure (GCM) and conditional Granger causality measure (cGCM) are widely used statistical methods for…

Methodology · Statistics 2022-09-08 Lipeng Ning

The Class Activation Map (CAM) lookup of a neural network tells us to which regions the neural network focuses when it makes a decision. In the past, the CAM search method was dependent upon a specific internal module of the network. It has…

Computer Vision and Pattern Recognition · Computer Science 2022-08-16 Yitao Peng , Longzhen Yang , Yihang Liu , Lianghua He

Neuroscientific studies aim to find an accurate and reliable brain Effective Connectome (EC). Although current EC discovery methods have contributed to our understanding of brain organization, their performances are severely constrained by…

Machine Learning · Computer Science 2024-03-12 Abdolmahdi Bagheri , Mahdi Dehshiri , Yamin Bagheri , Alireza Akhondi-Asl , Babak Nadjar Araabi

Functional magnetic resonance imaging (fMRI) provides an indirect measurement of neuronal activity via hemodynamic responses that vary across brain regions and individuals. Ignoring this hemodynamic variability can bias downstream…

Image and Video Processing · Electrical Eng. & Systems 2026-01-26 William Consagra , Eardi Lila

In this paper, we address technical difficulties that arise when applying Markov chain Monte Carlo (MCMC) to hierarchical models designed to perform clustering in the space of latent parameters of subject-wise generative models.…

Quantitative Methods · Quantitative Biology 2020-12-15 Yu Yao , Klaas E. Stephan

Brain signal visualization has emerged as an active research area, serving as a critical interface between the human visual system and computer vision models. Although diffusion models have shown promise in analyzing functional magnetic…

Computer Vision and Pattern Recognition · Computer Science 2023-12-19 Bohan Zeng , Shanglin Li , Xuhui Liu , Sicheng Gao , Xiaolong Jiang , Xu Tang , Yao Hu , Jianzhuang Liu , Baochang Zhang

Measuring functional connectivity from fMRI is important in understanding processing in cortical networks. However, because brain's connection pattern is complex, currently used methods are prone to produce false connections. We introduce…

Neurons and Cognition · Quantitative Biology 2020-06-23 Tiger w. Lin , Giri P. Krishnan , Maxim Bazhenov , Terrence J. Sejnowski

Demystifying effective connectivity among neuronal populations has become the trend to understand the brain mechanisms of Parkinson's disease, schizophrenia, mild traumatic brain injury, and many other unlisted neurological diseases.…

Quantitative Methods · Quantitative Biology 2019-09-27 Po-Ya Hsu

Understanding causal relationships within a system is crucial for uncovering its underlying mechanisms. Causal discovery methods, which facilitate the construction of such models from time-series data, hold the potential to significantly…

Machine Learning · Computer Science 2024-07-31 Zsigmond Benkő , Bálint Varga , Marcell Stippinger , Zoltán Somogyvári

Functional magnetic resonance imaging (fMRI) is widely used for studying and diagnosing brain disorders, with functional connectivity (FC) matrices providing powerful representations of large-scale neural interactions. However, existing…

Tissues and Organs · Quantitative Biology 2026-04-17 Qianyu Chen , Shujian Yu

An increasingly important brain function analysis modality is functional connectivity analysis which regards connections as statistical codependency between the signals of different brain regions. Graph-based analysis of brain connectivity…

Signal Processing · Electrical Eng. & Systems 2024-01-08 Fengfan Zhao , Ercan Engin Kuruoglu

This paper proposes a dynamic capacitance matching (DCM)-based RC current response algorithm for calculating the current waveform of a signal line without performing SPICE simulation. Specifically, unlike previous method such as CCS model,…

Systems and Control · Electrical Eng. & Systems 2024-01-17 Zhoujie Wu , Cai Luo , Zhong Guan

To determine causal relationships between two variables, approaches based on Functional Causal Models (FCMs) have been proposed by properly restricting model classes; however, the performance is sensitive to the model assumptions, which…

Machine Learning · Computer Science 2022-03-30 Ruibo Tu , Kun Zhang , Hedvig Kjellström , Cheng Zhang

In this study we adopt predictive modelling to identify simultaneously commonalities and differences in multi-modal brain networks acquired within subjects. Typically, predictive modelling of functional connectomes from structural…

Neurons and Cognition · Quantitative Biology 2019-11-06 Fani Deligianni , Jonathan D. Clayden , Guang-Zhong Yang

We present a computational framework for analysis and visualization of non-linear functional connectivity in the human brain from resting state functional MRI (fMRI) data for purposes of recovering the underlying network community structure…

Neural and Evolutionary Computing · Computer Science 2014-07-16 Axel Wismüller , Xixi Wang , Adora M. DSouza , Mahesh B. Nagarajan