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Probabilistic graphical models (PGMs) are widely used to discover latent structure in data, but their success hinges on selecting an appropriate model design. In practice, model specification is difficult and often requires iterative…

Machine Learning · Computer Science 2026-04-08 Kevin Zhang , Yixin Wang

We study the problem of learning associative memory -- a system which is able to retrieve a remembered pattern based on its distorted or incomplete version. Attractor networks provide a sound model of associative memory: patterns are stored…

Machine Learning · Statistics 2021-04-21 Sergey Bartunov , Jack W Rae , Simon Osindero , Timothy P Lillicrap

The Transformer architecture, underpinned by the self-attention mechanism, has become the de facto standard for sequence modeling tasks. However, its core computational primitive scales quadratically with sequence length (O(N^2)), creating…

Computation and Language · Computer Science 2025-09-03 Rishiraj Acharya

It has been observed that deep neural networks (DNNs) often use both genuine as well as spurious features. In this work, we propose "Amending Inherent Interpretability via Self-Supervised Masking" (AIM), a simple yet interestingly effective…

Computer Vision and Pattern Recognition · Computer Science 2025-08-18 Eyad Alshami , Shashank Agnihotri , Bernt Schiele , Margret Keuper

For over a decade now we have been witnessing the success of {\em massive parallel computation} (MPC) frameworks, such as MapReduce, Hadoop, Dryad, or Spark. One of the reasons for their success is the fact that these frameworks are able to…

Data Structures and Algorithms · Computer Science 2018-02-02 Artur Czumaj , Jakub Łącki , Aleksander Mądry , Slobodan Mitrović , Krzysztof Onak , Piotr Sankowski

Machine learning interatomic potentials (MLIPs) have transformed materials discovery by leveraging graph neural networks (GNNs) to predict material properties with near density functional theory (DFT) accuracy. While large-scale pretrained…

Materials Science · Physics 2026-05-29 Rushikesh Pawar , Harshit Rawat , Ayush Kumar , Phani Motamarri

Frequent-pattern mining is a common approach to reveal the valuable hidden trends behind data. However, existing frequent-pattern mining algorithms are designed for DRAM, instead of persistent memories (PMs), which can lead to severe…

Databases · Computer Science 2020-08-26 Jiaqi Dong , Runyu Zhang , Chaoshu Yang , Yujuan Tan , Duo Liu

Recent advances in machine-learned interatomic potentials largely benefit from the atomistic representation and locally invariant many-body descriptors. It was however recently argued that including three- (or even four-) body features is…

Chemical Physics · Physics 2021-10-14 Yaolong Zhang , Junfan Xia , Bin Jiang

Machine-learning models in chemistry - when based on descriptors of atoms embedded within molecules - face essential challenges in transferring the quality of predictions of local electronic structures and their associated properties across…

Chemical Physics · Physics 2024-09-27 Frederik Ø. Kjeldal , Janus J. Eriksen

Understanding the intricate operations of Recurrent Neural Networks (RNNs) mechanistically is pivotal for advancing their capabilities and applications. In this pursuit, we propose the Episodic Memory Theory (EMT), illustrating that RNNs…

Neural and Evolutionary Computing · Computer Science 2023-10-05 Arjun Karuvally , Peter Delmastro , Hava T. Siegelmann

We optimize the matrix representation of the nucleon-pair approximation (NPA) of the nuclear shell model. The NPA is a widely adopted truncation approach of the nuclear shell model and proves to be effective in describing low-lying states…

Nuclear Theory · Physics 2022-01-27 Y. Lei , Y. Lu

The continual learning literature has rapidly shifted from traditional class incremental learning (CIL) techniques to foundation model (FM)-based CIL methods without a clear understanding of how these newer approaches compare to strong,…

Machine Learning · Computer Science 2026-03-24 Elif Ceren Gok Yildirim , Murat Onur Yildirim , Joaquin Vanschoren

Accurate and scalable machine-learned inter-atomic potentials (MLIPs) are essential for molecular simulations ranging from drug discovery to new material design. Current state-of-the-art models enforce roto-translational symmetries through…

Generative molecular design has moved from proof-of-concept to real-world applicability, as marked by the surge in very recent papers reporting experimental validation. Key challenges in explainability and sample efficiency present…

Biomolecules · Quantitative Biology 2024-03-05 Jeff Guo , Philippe Schwaller

To enable reliable long-term interaction, LLM agents require a memory system that can faithfully store, efficiently retrieve, and deeply reason over accumulated dialogue history. Most existing methods adopt an extracted fact based paradigm:…

Computation and Language · Computer Science 2026-05-20 Jingwei Sun , Jianing Zhu , Jiangchao Yao , Tongliang Liu , Bo Han

Recently, studying fundamental graph problems in the \emph{Massively Parallel Computation (MPC) framework, inspired by the MapReduce paradigm, has gained a lot of attention. An assumption common to a vast majority of approaches is to allow…

Data Structures and Algorithms · Computer Science 2019-05-28 Sebastian Brandt , Manuela Fischer , Jara Uitto

Currently, identification of crystallization pathways in polymers is being carried out using molecular simulation-based data on a preset cut-off point on a single order parameter (OP) to define nucleated or crystallized regions. Aside from…

Computational Physics · Physics 2025-07-25 Elyar Tourani , Brian J. Edwards , Bamin Khomami

Structure learning is a core problem in AI central to the fields of neuro-symbolic AI and statistical relational learning. It consists in automatically learning a logical theory from data. The basis for structure learning is mining…

Artificial Intelligence · Computer Science 2023-06-21 Jonathan Feldstein , Dominic Phillips , Efthymia Tsamoura

A common problem in bioinformatics is related to identifying gene regulatory regions marked by relatively high frequencies of motifs, or deoxyribonucleic acid sequences that often code for transcription and enhancer proteins. Predicting…

Genomics · Quantitative Biology 2021-01-22 Ethan Jacob Moyer , Anup Das

Recently, masked image modeling (MIM), which learns visual representations by reconstructing the masked patches of an image, has dominated self-supervised learning in computer vision. However, the pre-training of MIM always takes massive…

Computer Vision and Pattern Recognition · Computer Science 2024-10-01 Jie Gui , Tuo Chen , Minjing Dong , Zhengqi Liu , Hao Luo , James Tin-Yau Kwok , Yuan Yan Tang