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Electroencephalography (EEG) research typically focuses on tasks with narrowly defined objectives, but recent studies are expanding into the use of unlabeled data within larger models, aiming for a broader range of applications. This…

Signal Processing · Electrical Eng. & Systems 2025-05-26 Anders Gjølbye , Lina Skerath , William Lehn-Schiøler , Nicolas Langer , Lars Kai Hansen

We introduce a unified benchmarking framework focused on evaluating EEG-based foundation models in clinical applications. The benchmark spans 11 well-defined diagnostic tasks across 14 publicly available EEG datasets, including epilepsy,…

Machine Learning · Computer Science 2025-12-11 Ard Kastrati , Josua Bürki , Jonas Lauer , Cheng Xuan , Raffaele Iaquinto , Roger Wattenhofer

Electrocardiography is a very common, non-invasive diagnostic procedure and its interpretation is increasingly supported by automatic interpretation algorithms. The progress in the field of automatic ECG interpretation has up to now been…

Machine Learning · Computer Science 2020-04-29 Nils Strodthoff , Patrick Wagner , Tobias Schaeffter , Wojciech Samek

Normalization is a critical yet often overlooked component in the preprocessing pipeline for EEG deep learning applications. The rise of large-scale pretraining paradigms such as self-supervised learning (SSL) introduces a new set of tasks…

Signal Processing · Electrical Eng. & Systems 2025-07-01 Dung Truong , Arnaud Delorme

Electrocardiogram (ECG) foundation models pretrained on typical diagnostic 10-second ECG segments, have demonstrated strong transferability across a range of clinical applications. However, many real-world applications produce recordings…

In recent years, self-supervised learning methods have shown significant improvement for pre-training with unlabeled data and have proven helpful for electrocardiogram signals. However, most previous pre-training methods for…

Machine Learning · Computer Science 2022-03-21 Jungwoo Oh , Hyunseung Chung , Joon-myoung Kwon , Dong-gyun Hong , Edward Choi

Foundation models for medical imaging are typically pretrained on increasingly large datasets, following a "scale-at-all-costs" paradigm. However, this strategy faces two critical challenges: large-scale medical datasets often contain…

Normalization and scaling are fundamental preprocessing steps in time series modeling, yet their role in Transformer-based models remains underexplored from a theoretical perspective. In this work, we present the first formal analysis of…

Machine Learning · Computer Science 2026-02-20 Sofiane Ennadir , Tianze Wang , Oleg Smirnov , Sahar Asadi , Lele Cao

Cardiovascular diseases (CVDs) remain a leading cause of mortality worldwide, underscoring the importance of accurate and scalable diagnostic systems. Electrocardiogram (ECG) analysis is central to detecting cardiac abnormalities, yet…

Machine Learning · Computer Science 2025-09-12 Md. Sajeebul Islam Sk. , Md Jobayer , Md Mehedi Hasan Shawon , Md. Golam Raibul Alam

As AI workloads increase in scope, generalization capability becomes challenging for small task-specific models and their demand for large amounts of labeled training samples increases. On the contrary, Foundation Models (FMs) are trained…

Artificial Intelligence · Computer Science 2024-04-19 Aristeidis Tsaris , Philipe Ambrozio Dias , Abhishek Potnis , Junqi Yin , Feiyi Wang , Dalton Lunga

Recent advancements for large-scale pre-training with neural signals such as electroencephalogram (EEG) have shown promising results, significantly boosting the development of brain-computer interfaces (BCIs) and healthcare. However, these…

Signal Processing · Electrical Eng. & Systems 2025-03-21 Wei-Bang Jiang , Yansen Wang , Bao-Liang Lu , Dongsheng Li

Time-series analysis plays a pivotal role across a range of critical applications, from finance to healthcare, which involves various tasks, such as forecasting and classification. To handle the inherent complexities of time-series data,…

Machine Learning · Computer Science 2024-05-20 Jiawei Li , Jingshu Peng , Haoyang Li , Lei Chen

With the growing interest in foundation models for brain signals, graph-based pretraining has emerged as a promising paradigm for learning transferable representations from connectome data. However, existing contrastive and masked…

Machine Learning · Computer Science 2026-03-10 Xinxu Wei , Rong Zhou , Lifang He , Yu Zhang

We present a methodology for training foundational transformer models capable of processing collider data with diverse kinematic signatures. Our universal foundation model is designed for simultaneous analysis of all processes involving…

High Energy Physics - Phenomenology · Physics 2025-11-13 E. Abasov , L. Dudko , E. Iudin , A. Markina , P. Volkov , M. Perfilov , A. Zaborenko

Foundation models have made rapid advances in many domains including Earth observation, where Geospatial Foundation Models (GFMs) can help address global challenges such as climate change, agriculture, and disaster response. Previous work…

Machine Learning · Computer Science 2025-01-23 Mirali Purohit , Gedeon Muhawenayo , Esther Rolf , Hannah Kerner

Neural network models have demonstrated impressive performance in predicting pathologies and outcomes from the 12-lead electrocardiogram (ECG). However, these models often need to be trained with large, labelled datasets, which are not…

Machine Learning · Computer Science 2022-04-12 Aniruddh Raghu , Divya Shanmugam , Eugene Pomerantsev , John Guttag , Collin M. Stultz

Understanding and decoding brain activity from electroencephalography (EEG) signals is a fundamental challenge in neuroscience and AI, with applications in cognition, emotion recognition, diagnosis, and brain-computer interfaces. While…

Human-Computer Interaction · Computer Science 2025-07-01 Yuchen Zhou , Jiamin Wu , Zichen Ren , Zhouheng Yao , Weiheng Lu , Kunyu Peng , Qihao Zheng , Chunfeng Song , Wanli Ouyang , Chao Gou

EEG-based emotion recognition is hampered by profound dataset heterogeneity (channel/subject variability), hindering generalizable models. Existing approaches struggle to transfer knowledge effectively. We propose 'One Model for All', a…

Machine Learning · Computer Science 2025-11-12 Xiang Li , You Li , Yazhou Zhang

Foundation models for computational pathology are expected to facilitate the development of high-performing, generalisable deep learning systems. However, in addition to biologically relevant features, current foundation models also capture…

Vision foundation models are increasingly moving beyond 2D to volumetric domains such as 3D medical imaging, where unified pretraining across different imaging modalities (i.e. CT, MRI, and PET) could provide foundational models for diverse…

Computer Vision and Pattern Recognition · Computer Science 2026-05-11 Ho Hin Lee , Dongna Du , Chu Wang , Yuankai Huo , Shi Gu , James C. Gee , Yifan Wu