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A method for encoding information in DNA sequences is described. The method is based on the precision-resolution framework, and is aimed to work in conjunction with a recently suggested terminator-free template independent DNA synthesis…

Information Theory · Computer Science 2020-05-14 Siddharth Jain , Farzad Farnoud , Moshe Schwartz , Jehoshua Bruck

Several types of AL-FEC (Application-Level FEC) codes for the Packet Erasure Channel exist. Random Linear Codes (RLC), where redundancy packets consist of random linear combinations of source packets over a certain finite field, are a…

Information Theory · Computer Science 2014-08-26 Kazuhisa Matsuzono , Vincent Roca , Hitoshi Asaeda

Error-correcting codes over sets, with applications to DNA storage, are studied. The DNA-storage channel receives a set of sequences, and produces a corrupted version of the set, including sequence loss, symbol substitution, symbol…

Information Theory · Computer Science 2021-07-12 Hengjia Wei , Moshe Schwartz

Motivation: RNA design aims to find RNA sequences that fold into a given target secondary structure, a problem also known as RNA inverse folding. However, not all target structures are designable. Recent advances in RNA designability have…

Data Structures and Algorithms · Computer Science 2026-04-28 Tianshuo Zhou , David H. Mathews , Liang Huang

Shaping codes are used to generate code sequences in which the symbols obey a prescribed probability distribution. They arise naturally in the context of source coding for noiseless channels with unequal symbol costs. Recently, shaping…

Information Theory · Computer Science 2022-05-10 Yi Liu , Yonglong Li , Pengfei Huang , Paul H. Siegel

Evaluating the performance of generative models in image synthesis is a challenging task. Although the Fr\'echet Inception Distance is a widely accepted evaluation metric, it integrates different aspects (e.g., fidelity and diversity) of…

Computer Vision and Pattern Recognition · Computer Science 2021-06-07 Ryoungwoo Jang , Minjee Kim , Da-in Eun , Kyungjin Cho , Jiyeon Seo , Namkug Kim

This paper shows that, with high probability, randomly punctured Reed-Solomon codes over fields of polynomial size achieve the list decoding capacity. More specifically, we prove that for any $\epsilon>0$ and $R\in (0,1)$, with high…

Information Theory · Computer Science 2025-09-03 Zeyu Guo , Zihan Zhang

In this work, we prove new results concerning the combinatorial properties of random linear codes. Firstly, we prove a lower bound on the list-size required for random linear codes over $\mathbb F_q$ $\varepsilon$-close to capacity to…

Information Theory · Computer Science 2022-05-04 Nicolas Resch , Chen Yuan

We obtain exact expressions for the asymptotic behaviour of the average probability of the block decoding error for ensembles of regular low density parity check error correcting codes, by employing diagrammatic techniques. Furthermore, we…

Statistical Mechanics · Physics 2007-05-23 J. van Mourik , Y. Kabashima

The random number generators (RNGs) are an indispensable tool in cryptography. Of various types of RNG method, those using radiations from nuclear decays (radioactive RNG) has a relatively long history but their security has never been…

Quantum Physics · Physics 2022-07-05 Toyohiro Tsurumaru , Toshihiko Sasaki , Izumi Tsutsui

Random linear network coding (RLNC) in theory achieves the max-flow capacity of multicast networks, at the cost of high decoding complexity. To improve the performance-complexity tradeoff, we consider the design of sparse network codes. A…

Information Theory · Computer Science 2016-04-20 Ye Li , Wai-Yip Chan , Steven D. Blostein

This paper introduces a new family of reconstruction codes which is motivated by applications in DNA data storage and sequencing. In such applications, DNA strands are sequenced by reading some subset of their substrings. While previous…

Information Theory · Computer Science 2022-05-10 Yonatan Yehezkeally , Daniella Bar-Lev , Sagi Marcovich , Eitan Yaakobi

In this paper, we propose a strategy for making DNA-based data storage information-theoretically secure through the use of wiretap channel coding. This motivates us to extend the shuffling-sampling channel model of Shomorony and Heckel…

Information Theory · Computer Science 2022-11-28 Praneeth Kumar Vippathalla , Navin Kashyap

Analysing statistical properties of the normal forms of random braids, we observe that, except for an initial and a final region whose lengths are uniformly bounded (that is, the bound is independent of the length of the braid), the…

Group Theory · Mathematics 2014-06-24 Volker Gebhardt , Stephen Tawn

In this paper, we study the coding delay and the average coding delay of random linear network codes (dense codes) over line networks with deterministic regular and Poisson transmission schedules. We consider both lossless networks and…

Information Theory · Computer Science 2012-02-03 Anoosheh Heidarzadeh , Amir H. Banihashemi

Data transfer in opportunistic Delay Tolerant Networks (DTNs) must rely on unscheduled sporadic meetings between nodes. The main challenge in these networks is to develop a mechanism based on which nodes can learn to make nearly optimal…

Networking and Internet Architecture · Computer Science 2015-06-19 Shohreh Shaghaghian , Mark Coates

By a locally recoverable code (LRC), we will in this paper, mean a linear code in which a given code symbol can be recovered by taking a linear combination of at most $r$ other code symbols with $r << k$. A natural extension is to the local…

Information Theory · Computer Science 2018-12-07 S. B. Balaji , Ganesh R. Kini , P. Vijay Kumar

A quantum encryption scheme (also called private quantum channel, or state randomization protocol) is a one-time pad for quantum messages. If two parties share a classical random string, one of them can transmit a quantum state to the other…

Quantum Physics · Physics 2007-05-23 Andris Ambainis , Adam Smith

Wideband communication receivers often deal with the problems of detecting weak signals from distant sources received together with strong nearby interferers. When the techniques of random modulation are used in communication system…

Information Theory · Computer Science 2018-11-15 Dian Mo , Marco F. Duarte

This paper tackles two problems that fall under the study of coding for insertions and deletions. These problems are motivated by several applications, among them is reconstructing strands in DNA-based storage systems. Under this paradigm,…

Information Theory · Computer Science 2025-06-23 Omer Sabary , Daniella Bar-Lev , Yotam Gershon , Alexander Yucovich , Eitan Yaakobi
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