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Prediction and control of chemical mixing are vital for many scientific areas such as subsurface reactive transport, climate modeling, combustion, epidemiology, and pharmacology. Due to the complex nature of mixing in heterogeneous and…

Machine Learning · Computer Science 2021-12-15 N. V. Jagtap , M. K. Mudunuru , K. B. Nakshatrala

A central challenge in computational catalysis is the identification of low-energy and chemically plausible adsorption configurations, as these directly affect adsorption energies, reaction pathways, and catalytic performance. Existing…

Materials Science · Physics 2026-05-07 Yifan Li , Arravind Subramanian , Xiaoqing Liu , Qiujie Lyu , Sergey Kozlov , Lei Shen

Kernel density estimation (KDE) is one of the most widely used nonparametric density estimation methods. The fact that it is a memory-based method, i.e., it uses the entire training data set for prediction, makes it unsuitable for most…

Machine Learning · Computer Science 2022-08-08 Joseph A. Gallego , Juan F. Osorio , Fabio A. González

Based on the contractor renormalization group (CORE) method and the density matrix renormalization group (DMRG) method, a new computational scheme, which is called the block density matrix renormalization group with effective interactions…

Strongly Correlated Electrons · Physics 2009-11-18 Haibo Ma , Chungen Liu , Yuansheng Jiang

Automating molecular design using deep reinforcement learning (RL) holds the promise of accelerating the discovery of new chemical compounds. Existing approaches work with molecular graphs and thus ignore the location of atoms in space,…

Machine Learning · Statistics 2021-03-02 Gregor N. C. Simm , Robert Pinsler , José Miguel Hernández-Lobato

Kernel Density Estimation (KDE) is a nonparametric method for estimating the shape of a density function, given a set of samples from the distribution. Recently, locality-sensitive hashing, originally proposed as a tool for nearest neighbor…

Data Structures and Algorithms · Computer Science 2022-03-02 Matti Karppa , Martin Aumüller , Rasmus Pagh

In the real world, a molecule is a 3D geometric structure. Compared to 1D SMILES sequences and 2D molecular graphs, 3D molecules represent the most informative molecular modality. Despite the rapid progress of autoregressive-based language…

Computational Engineering, Finance, and Science · Computer Science 2025-08-15 Lei Jiang , Shuzhou Sun , Biqing Qi , Yuchen Fu , Xiaohua Xu , Yuqiang Li , Dongzhan Zhou , Tianfan Fu

Identifying where quantum models may offer practical benefits in near term quantum machine learning (QML) requires moving beyond isolated algorithmic proposals toward systematic and empirical exploration across models, datasets, and…

A Kohn-Sham scheme based multi-task neural network is elaborated for the supervised learning of nuclear shell evolution. The training set is composed of the single-particle wave functions and occupation probabilities of 320 nuclei,…

Nuclear Theory · Physics 2023-11-23 Zu-Xing Yang , Xiao-Hua Fan , Zhi-Pan Li , Haozhao Liang

Multiple kernel clustering (MKC) is committed to achieving optimal information fusion from a set of base kernels. Constructing precise and local kernel matrices is proved to be of vital significance in applications since the unreliable…

Machine Learning · Computer Science 2022-07-08 Liang Li , Siwei Wang , Xinwang Liu , En Zhu , Li Shen , Kenli Li , Keqin Li

The efficiency of GPU kernels is central to the progress of modern AI, yet optimizing them remains a difficult and labor-intensive task due to complex interactions between memory hierarchies, thread scheduling, and hardware-specific…

Artificial Intelligence · Computer Science 2025-10-21 Juncheng Dong , Yang Yang , Tao Liu , Yang Wang , Feng Qi , Vahid Tarokh , Kaushik Rangadurai , Shuang Yang

This paper introduces a novel approach to probabilistic deep learning, kernel density matrices, which provide a simpler yet effective mechanism for representing joint probability distributions of both continuous and discrete random…

Machine Learning · Computer Science 2024-05-01 Fabio A. González , Raúl Ramos-Pollán , Joseph A. Gallego-Mejia

Combinatorial optimization (CO) aims to efficiently find the best solution to NP-hard problems ranging from statistical physics to social media marketing. A wide range of CO applications can benefit from local search methods because they…

Machine Learning · Computer Science 2023-04-14 Yuanhang Shao , Tonmoy Dey , Nikola Vuckovic , Luke Van Popering , Alan Kuhnle

Running Deep Neural Network (DNN) models on devices with limited computational capability is a challenge due to large compute and memory requirements. Quantized Neural Networks (QNNs) have emerged as a potential solution to this problem,…

Computer Vision and Pattern Recognition · Computer Science 2018-05-31 Yaman Umuroglu , Magnus Jahre

An adpative integration technique for time advancement of particle motion in the context of coupled computational fluid dynamics (CFD) - discrete element method (DEM) simulations is presented in this work. CFD-DEM models provide an accurate…

Computational Physics · Physics 2018-02-28 Hariswaran Sitaraman , Ray Grout

Fidelity-based quantum kernels provide a direct interface between quantum feature maps and classical kernel methods, but they can exhibit exponential concentration: with increasing system size or circuit expressivity, the Gram matrix…

Quantum Physics · Physics 2026-02-19 Claudia Zendejas-Morales , Debashis Saikia , Utkarsh Singh

Meshless methods are commonly used to determine numerical solutions to partial differential equations (PDEs) for problems involving free surfaces and/or complex geometries, approximating spatial derivatives at collocation points via local…

Numerical Analysis · Mathematics 2025-10-24 H. Broadley , J. R. C. King , S. J. Lind

The density matrix renormalization group (DMRG) algorithm is a cornerstone computational method for studying quantum many-body systems, renowned for its accuracy and adaptability. Despite DMRG's broad applicability across fields such as…

Computational Physics · Physics 2026-03-24 Per Sehlstedt , Jan Brandejs , Paolo Bientinesi , Lars Karlsson

There is a rich literature on clustering functional data with applications to time-series modeling, trajectory data, and even spatio-temporal applications. However, existing methods routinely perform global clustering that enforces…

Methodology · Statistics 2024-12-16 Tsung-Hung Yao , Suprateek Kundu

Objective: Model based deep learning (MBDL) has been challenging to apply to the reconstruction of 3D non-Cartesian MRI acquisitions due to extreme GPU memory demand (>250 GB using traditional backpropagation) primarily because the entire…

Medical Physics · Physics 2023-04-05 Zachary Miller , Ali Pirasteh , Kevin M. Johnson
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