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The application of large language models (LLMs) to graph data has attracted a lot of attention recently. LLMs allow us to use deep contextual embeddings from pretrained models in text-attributed graphs, where shallow embeddings are often…

Artificial Intelligence · Computer Science 2025-02-19 Shima Khoshraftar , Niaz Abedini , Amir Hajian

Large Language Models are increasingly used by students to explore advanced material in computer science, including graph theory. As these tools become integrated into undergraduate and graduate coursework, it is important to understand how…

Artificial Intelligence · Computer Science 2026-02-06 Adithya Kulkarni , Mohna Chakraborty , Jay Bagga

Large Language Models (LLMs) have demonstrated remarkable performance across various natural language processing tasks. Recently, several LLMs-based pipelines have been developed to enhance learning on graphs with text attributes,…

Machine Learning · Computer Science 2024-07-30 Kai Guo , Zewen Liu , Zhikai Chen , Hongzhi Wen , Wei Jin , Jiliang Tang , Yi Chang

Recent advancements in Multimodal Large Language Models (MLLMs) have demonstrated remarkable progress in visual understanding. This impressive leap raises a compelling question: how can language models, initially trained solely on…

Computer Vision and Pattern Recognition · Computer Science 2025-11-12 Jing Bi , Junjia Guo , Yunlong Tang , Lianggong Bruce Wen , Zhang Liu , Chenliang Xu

Text-Attributed Graphs (TAGs) are graphs of connected textual documents. Graph models can efficiently learn TAGs, but their training heavily relies on human-annotated labels, which are scarce or even unavailable in many applications. Large…

Computation and Language · Computer Science 2024-08-07 Bo Pan , Zheng Zhang , Yifei Zhang , Yuntong Hu , Liang Zhao

Leveraging Graph Neural Networks (GNNs) as graph encoders and aligning the resulting representations with Large Language Models (LLMs) through alignment instruction tuning has become a mainstream paradigm for constructing Graph Language…

Machine Learning · Computer Science 2026-05-13 Haibo Chen , Xin Wang , Jiaheng Chao , Ling Feng , Wenwu Zhu

Recently, large language models (LLMs) have been widely researched in the field of graph machine learning due to their outstanding abilities in language comprehension and learning. However, the significant gap between natural language tasks…

Artificial Intelligence · Computer Science 2024-06-21 Zhong Guan , Hongke Zhao , Likang Wu , Ming He , Jianpin Fan

Improving the general capabilities of large language models (LLMs) is an active research topic. As a common data structure in many real-world domains, understanding graph data is a crucial part of advancing general intelligence. To this…

Artificial Intelligence · Computer Science 2025-11-19 Zihan Luo , Xiran Song , Hong Huang , Jianxun Lian , Chenhao Zhang , Jinqi Jiang , Xing Xie , Hai Jin

While large language models (LLMs) have made considerable advancements in understanding and generating unstructured text, their application in structured data remains underexplored. Particularly, using LLMs for complex reasoning tasks on…

Computation and Language · Computer Science 2023-10-18 Jiho Kim , Yeonsu Kwon , Yohan Jo , Edward Choi

Large Language Models (LLMs) excel at generating natural language answers, yet their outputs often remain unverifiable and difficult to trace. Knowledge Graphs (KGs) offer a complementary strength by representing entities and their…

Computation and Language · Computer Science 2025-12-05 Alfonso Amayuelas , Joy Sain , Simerjot Kaur , Charese Smiley

Large Language Models (LLMs) exhibit strong reasoning capabilities on structured tasks, yet the internal mechanisms underlying such behaviors remain poorly understood. Existing interpretation methods mainly focus on token-level…

Computation and Language · Computer Science 2026-02-02 Xinnan Dai , Xianxuan Long , Chung-Hsiang Lo , Kai Guo , Shenglai Zeng , Dongsheng Luo , Jiliang Tang

Graph Transformers (GTs) show considerable potential in graph representation learning. The architecture of GTs typically integrates Graph Neural Networks (GNNs) with global attention mechanisms either in parallel or as a precursor to…

Machine Learning · Computer Science 2026-02-04 Gang Wu , Zhengwei Wang

Academic question answering (QA) in heterogeneous scholarly networks presents unique challenges requiring both structural understanding and interpretable reasoning. While graph neural networks (GNNs) capture structured graph information and…

Social and Information Networks · Computer Science 2026-01-30 Runsong Jia , Mengjia Wu , Ying Ding , Jie Lu , Yi Zhang

Large scale pretrained models have revolutionized Natural Language Processing (NLP) and Computer Vision (CV), showcasing remarkable cross domain generalization abilities. However, in graph learning, models are typically trained on…

Computation and Language · Computer Science 2025-10-03 Ruyue Liu , Rong Yin , Xiangzhen Bo , Xiaoshuai Hao , Yong Liu , Jinwen Zhong , Can Ma , Weiping Wang

Large Language Models (LLMs) have been shown to be effective models of the human language system, with some models predicting most explainable variance of brain activity in current datasets. Even in untrained models, the representations…

Computation and Language · Computer Science 2024-06-24 Badr AlKhamissi , Greta Tuckute , Antoine Bosselut , Martin Schrimpf

Language Models (LMs) are increasingly challenging the dominance of domain-specific models, such as Graph Neural Networks (GNNs) and Graph Transformers (GTs), in graph learning tasks. Following this trend, we propose a novel approach that…

Computation and Language · Computer Science 2026-01-27 Zhe Xu , Kaveh Hassani , Si Zhang , Hanqing Zeng , Michihiro Yasunaga , Limei Wang , Dongqi Fu , Ning Yao , Bo Long , Hanghang Tong

Large Language Models (LLMs) have shown promising results on various language and vision tasks. Recently, there has been growing interest in applying LLMs to graph-based tasks, particularly on Text-Attributed Graphs (TAGs). However, most…

Machine Learning · Computer Science 2024-06-10 Zhongmou He , Jing Zhu , Shengyi Qian , Joyce Chai , Danai Koutra

Graphs are essential for modeling complex interactions across domains such as social networks, biology, and recommendation systems. Traditional Graph Neural Networks, particularly Message Passing Neural Networks (MPNNs), rely heavily on…

Machine Learning · Computer Science 2025-06-13 Wei Li , Mengcheng Lan , Jiaxing Xu , Yiping Ke

We argue that Transformers are essentially graph-to-graph models, with sequences just being a special case. Attention weights are functionally equivalent to graph edges. Our Graph-to-Graph Transformer architecture makes this ability…

Computation and Language · Computer Science 2023-10-30 James Henderson , Alireza Mohammadshahi , Andrei C. Coman , Lesly Miculicich

Graph Neural Networks (GNNs) have emerged as powerful models for learning from graph-structured data. However, GNNs lack the inherent semantic understanding capability of rich textual node attributes, limiting their effectiveness in…

Artificial Intelligence · Computer Science 2025-09-04 Hanqi Duan , Yao Cheng , Jianxiang Yu , Yao Liu , Xiang Li